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Julie A. I. Thoms
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Journal Articles

Genome-wide transcription factor–binding maps reveal cell-specific changes in the regulatory architecture of human HSPCs

Shruthi Subramanian, Julie A. I. Thoms, Yizhou Huang, Paola Cornejo-Páramo, Forrest C. Koch, Sebastien Jacquelin, Sylvie Shen, Emma Song, Swapna Joshi, Chris Brownlee, Petter S. Woll, Diego Chacon-Fajardo, Dominik Beck, David J. Curtis, Kenneth Yehson, Vicki Antonenas, Tracey O'Brien, Annette Trickett, Jason A. Powell, Ian D. Lewis, Stuart M. Pitson, Maher K. Gandhi, Steven W. Lane, Fatemeh Vafaee, Emily S. Wong, Berthold Göttgens, Hamid Alinejad-Rokny, Jason W. H. Wong, John E. Pimanda
Journal: Blood
Blood (2023) 142 (17): 1448–1462.
https://doi.org/10.1182/blood.2023021120
Published: 2023
Includes: Supplemental data
Journal Articles

Contribution of mutant HSC clones to immature and mature cells in MDS and CMML, and variations with AZA therapy

Brief Report
Annatina S. Schnegg-Kaufmann, Julie A. I. Thoms, Golam Sarower Bhuyan, Henry R. Hampton, Lachlin Vaughan, Kayleigh Rutherford, Purvi M. Kakadia, Hui Mei Lee, Emma M. V. Johansson, Timothy W. Failes, Greg M. Arndt, Jason Koval, Robert Lindeman, Pauline Warburton, Alba Rodriguez-Meira, Adam J. Mead, Ashwin Unnikrishnan, Sarah Davidson, Mark N. Polizzotto, Mark Hertzberg, Elli Papaemmanuil, Stefan K. Bohlander, Omid R. Faridani, Christopher J. Jolly, Fabio Zanini, John E. Pimanda
Journal: Blood
Blood (2023) 141 (11): 1316–1321.
https://doi.org/10.1182/blood.2022018602
Published: 2023
Includes: Supplemental data
Journal Articles

Disruption of a GATA2-TAL1-ERG regulatory circuit promotes erythroid transition in healthy and leukemic stem cells

Julie A. I. Thoms, Peter Truong, Shruthi Subramanian, Kathy Knezevic, Gregory Harvey, Yizhou Huang, Janith A. Seneviratne, Daniel R. Carter, Swapna Joshi, Joanna Skhinas, Diego Chacon, Anushi Shah, Ineke de Jong, Dominik Beck, Berthold Göttgens, Jonas Larsson, Jason W. H. Wong, Fabio Zanini, John E. Pimanda
Journal: Blood
Blood (2021) 138 (16): 1441–1455.
https://doi.org/10.1182/blood.2020009707
Published: 2021
Includes: Supplemental data
Journal Articles

To switch or not to switch: PU.1 expression is the question

Julie A. I. Thoms, John E. Pimanda, Olaf Heidenreich
Journal: Blood
Blood (2021) 138 (15): 1289–1291.
https://doi.org/10.1182/blood.2021012112
Published: 2021
Journal Articles

The EMT modulator SNAI1 contributes to AML pathogenesis via its interaction with LSD1

Catherine L. Carmichael, Jueqiong Wang, Thao Nguyen, Oluseyi Kolawole, Aissa Benyoucef, Charlotte De Mazière, Anna R. Milne, Sona Samuel, Kevin Gillinder, Soroor Hediyeh-zadeh, Anh N. Q. Vo, Yizhou Huang, Kathy Knezevic, William R. L. McInnes, Benjamin J. Shields, Helen Mitchell, Matthew E. Ritchie, Tim Lammens, Beatrice Lintermans, Pieter Van Vlierberghe, Nicholas C. Wong, Katharina Haigh, Julie A. I. Thoms, Emma Toulmin, David J. Curtis, Ethan P. Oxley, Ross A. Dickins, Dominik Beck, Andrew Perkins, Matthew P. McCormack, Melissa J. Davis, Geert Berx, Johannes Zuber, John E. Pimanda, Benjamin T. Kile, Steven Goossens, Jody J. Haigh
Journal: Blood
Blood (2020) 136 (8): 957–973.
https://doi.org/10.1182/blood.2019002548
Published: 2020
Includes: Supplemental data
Journal Articles

Opposing regulation of BIM and BCL2 controls glucocorticoid-induced apoptosis of pediatric acute lymphoblastic leukemia cells

Duohui Jing, Vivek A. Bhadri, Dominik Beck, Julie A. I. Thoms, Nurul A. Yakob, Jason W. H. Wong, Kathy Knezevic, John E. Pimanda, Richard B. Lock
Journal: Blood
Blood (2015) 125 (2): 273–283.
https://doi.org/10.1182/blood-2014-05-576470
Published: 2015
Includes: Supplemental data
Journal Articles

Identification of a Prognostic Gene Expression Signature for AZA Response in MDS and CMML Patients

Ashwin Unnikrishnan, PhD, Dominik Beck, PhD, Arjun Verma, Laura A Richards, Julie A I Thoms, PhD, Ashu Kumari, PhD, Sally Galbraith, PhD, Austin Kulasekararaj, Magnus Tobiasson, MD, Petter S Woll, PhD, Andrea Pellagatti, PhD, Elli Papaemmanuil, PhD, Susan R Wilson, PhD, Robert Lindeman, MD, Peter J Campbell, PhD, Jacqueline Boultwood, PhD, Kevin Lynch, MBBS, Sten Eirik W Jacobsen, MD PhD, Ghulam J. Mufti, DM, FRCP, FRCPath, Eva Hellstrom-Lindberg, MD PhD, Karen L MacKenzie, PhD, Jason WH Wong, PhD, John E Pimanda, MD PhD
Journal: Blood
Blood (2014) 124 (21): 4601.
https://doi.org/10.1182/blood.V124.21.4601.4601
Published: 2014
Journal Articles

Genome-wide analysis of transcriptional regulators in human HSPCs reveals a densely interconnected network of coding and noncoding genes

e-blood
Dominik Beck, Julie A. I. Thoms, Dilmi Perera, Judith Schütte, Ashwin Unnikrishnan, Kathy Knezevic, Sarah J. Kinston, Nicola K. Wilson, Tracey A. O’Brien, Berthold Göttgens, Jason W. H. Wong, John E. Pimanda
Journal: Blood
Blood (2013) 122 (14): e12–e22.
https://doi.org/10.1182/blood-2013-03-490425
Published: 2013
Includes: Supplemental data
Journal Articles

Activity of a heptad of transcription factors is associated with stem cell programs and clinical outcome in acute myeloid leukemia

Eva Diffner, Dominik Beck, Emma Gudgin, Julie A. I. Thoms, Kathy Knezevic, Clare Pridans, Sam Foster, Debbie Goode, Weng Khong Lim, Lies Boelen, Klaus H. Metzeler, Gos Micklem, Stefan K. Bohlander, Christian Buske, Alan Burnett, Katrin Ottersbach, George S. Vassiliou, Jake Olivier, Jason W. H. Wong, Berthold Göttgens, Brian J. Huntly, John E. Pimanda
Journal: Blood
Blood (2013) 121 (12): 2289–2300.
https://doi.org/10.1182/blood-2012-07-446120
Published: 2013
Includes: Supplemental data
Journal Articles

ERG promotes T-acute lymphoblastic leukemia and is transcriptionally regulated in leukemic cells by a stem cell enhancer

Julie A. I. Thoms, Yehudit Birger, Sam Foster, Kathy Knezevic, Yael Kirschenbaum, Vashe Chandrakanthan, Georg Jonquieres, Dominik Spensberger, Jason W. Wong, S. Helen Oram, Sarah J. Kinston, Yoram Groner, Richard Lock, Karen L. MacKenzie, Berthold Göttgens, Shai Izraeli, John E. Pimanda
Journal: Blood
Blood (2011) 117 (26): 7079–7089.
https://doi.org/10.1182/blood-2010-12-317990
Published: 2011
Includes: Supplemental data