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Andy G.X. Zeng
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Journal Articles

Isomarker: An Explainable Machine Learning Framework for Identification of Cell State Markers in Acute Myeloid Leukemia

David Chen, Suraj Bansal, Amanda Mitchell, Anne Maria Tierens, Andy G.X. Zeng, John E. Dick
Journal: Blood
Blood (2024) 144 (Supplement 1): 1542.
https://doi.org/10.1182/blood-2024-210986
Published: 2024
Journal Articles

Resolving Human Hematopoietic Stem Cell Functional Heterogeneity with ATP2B1 Surface Expression

Angelica Varesi, Murtaza S. Nagree, Andy G.X. Zeng, Sayyam Shah, Hyerin Kim, John Edgar Dick, Stephanie Z. Xie
Journal: Blood
Blood (2024) 144 (Supplement 1): 28.
https://doi.org/10.1182/blood-2024-206006
Published: 2024
Journal Articles

Hallmarks of Transcriptional Heterogeneity in Human Hematopoietic Stem Cells across 382 Donors

Sayyam Shah, Murtaza S. Nagree, Chhiring Lama, Anna S. Nam, Andy G.X. Zeng, Stephanie Z Xie, John E. Dick
Journal: Blood
Blood (2024) 144 (Supplement 1): 1281.
https://doi.org/10.1182/blood-2024-212079
Published: 2024
Journal Articles

ATLAS-AML: An Automated Bioinformatics Pipeline for Drug Target Characterization in Acute Myeloid Leukemia

Suraj Bansal, David Chen, Amanda Mitchell, Andy G.X. Zeng, John E. Dick
Journal: Blood
Blood (2024) 144 (Supplement 1): 2924.
https://doi.org/10.1182/blood-2024-211344
Published: 2024
Journal Articles

The Exportin, CSE1L, Regulates Ribosome Biogenesis and Is a Selective Dependency in Childhood and Young Adult Acute Myeloid Leukemia

Grace Egan, Amit Kumar, Veronique Voisin, Rose Hurren, Ali Chegini, Dakai Ling, Geethu Emily Thomas, Youngran Yan, Yue Feng, Suraj Bansal, Andy G.X. Zeng, Andrea Arruda, John Edgar Dick, Gary D Bader, Mark D. Minden, Aaron D Schimmer
Journal: Blood
Blood (2024) 144 (Supplement 1): 2724.
https://doi.org/10.1182/blood-2024-200148
Published: 2024
Journal Articles

Identifying Stress Granules As Determinants of Leukemia Stem Cell Maintenance and Stress Adaptation

Amanda Tajik, Emily Tsao, Brendon Seale, Soheil Jahangiri, Belma Abidin, Lina Liu, Zaldy Balde, He Tian (Tony) Chen, Nicholas Wong, Ava Keyvani Chahi, Pratik Joshi, Steven Moreira, Curtis W. McCloskey, Shahbaz Khan, Helena Boutzen, Cassandra Wong, Suraj Bansal, Andy G.X. Zeng, Stefan Aigner, Yu Lu, John E. Dick, Thomas Kislinger, Rama Khokha, Mark D. Minden, Gene W. Yeo, Anne-Claude Gingras, Kristin J. Hope
Journal: Blood
Blood (2023) 142 (Supplement 1): 405.
https://doi.org/10.1182/blood-2023-180919
Published: 2023
Journal Articles

Single Cell Transcriptomic Analysis of B-Cell Acute Lymphoblastic Leukemia (B-ALL) Reveals Correlation between Leukemia Cell State, Genetic Alterations and Clinical Outcome

Ilaria Iacobucci, Andy G.X. Zeng, Qingsong Gao, Laura Garcia Prat, Pradyumna Baviskar, Sayyam Shah, Alexander Murison, Veronique Voisin, Colin Bailey, Matthew Lear, Anjali S. Advani, Selina M Luger, Elisabeth Paietta, Wendy Stock, John E. Dick, Charles G. Mullighan
Journal: Blood
Blood (2023) 142 (Supplement 1): 841.
https://doi.org/10.1182/blood-2023-190180
Published: 2023
Journal Articles

Precise Single-Cell Transcriptomic Mapping of Leukemia Cell States Reveals Unconventional Lineage Priming in Acute Myeloid Leukemia

Andy G.X. Zeng, Ilaria Iacobucci, Sayyam Shah, Gordon Wong, Amanda Mitchell, Qingsong Gao, Hyerin Kim, Mark D. Minden, Torsten Haferlach, Charles G. Mullighan, John E. Dick
Journal: Blood
Blood (2023) 142 (Supplement 1): 1593.
https://doi.org/10.1182/blood-2023-189697
Published: 2023
Journal Articles

XPO2 Is Essential for a Subset of AML Cells and Is a Biomarker for Poor Response and Survival in Pediatric and AYA AML

Grace Egan, Geethu Emily Thomas, Rose Hurren, Suraj Bansal, Andy G.X. Zeng, Chaitra Sarathy, Dilshad H. Khan, Yongran Yan, Yue Feng, Jonathan St-Germain, Brian Raught, John E. Dick, Aaron D. Schimmer
Journal: Blood
Blood (2023) 142 (Supplement 1): 5681.
https://doi.org/10.1182/blood-2023-180968
Published: 2023
Journal Articles

Somatic TET2 Mutations Prime the Immune System for Response to Immune Checkpoint Blockade

Robert Vanner, Andy G.X. Zeng, Michelle Chan-Seng-Yue, Suraj Bansal, Elisa Donato, Liqing Jin, Sofia Genta, Enrique Sanz Garcia, Steven M. Chan, Andreas Trumpp, John E. Dick
Journal: Blood
Blood (2023) 142 (Supplement 1): 2689.
https://doi.org/10.1182/blood-2023-177740
Published: 2023
Journal Articles

Investigation of CD83 As a Novel Human Hematopoietic Stem Cell Inflammatory Activation Marker

Murtaza S. Nagree, Andy G.X. Zeng, Angelica Varesi, Isabel N.X. Lim, Sayyam Shah, Hyerin Kim, Liqing Jin, Mason Boulanger, John E. Dick, Stephanie Z. Xie
Journal: Blood
Blood (2023) 142 (Supplement 1): 4067.
https://doi.org/10.1182/blood-2023-187737
Published: 2023
Journal Articles

Stem Cell-Derived Gene Expression Scores Predict Survival and Leukemic Transformation in Myelofibrosis

Jessie J.F. Medeiros, Andy G.X. Zeng, Michelle Chan-Seng-Yue, Tristan Woo, Jessica L McLeod, Andrea Arruda, Hubert Tsui, Burhan Goraya, Jaime O. Claudio, Jenny M. Ho, James A. Kennedy, Dawn Maze, Hassan Sibai, Mark D. Minden, Jean C.Y. Wang, John E. Dick, Vikas Gupta
Journal: Blood
Blood (2022) 140 (Supplement 1): 9681–9682.
https://doi.org/10.1182/blood-2022-163722
Published: 2022
Journal Articles

Simultaneous Inhibition of SIRT3 and Cholesterol Homeostasis Targets AML Stem Cells By Perturbing Fatty Acid β-Oxidation and Inducing Lipotoxicity

Cristiana O'Brien, Tianyi Ling, Jacob Berman, Rachel Culp-Hill, Julie A. Reisz, Vincent Rondeau, Soheil Jahangiri, Jonathan St-Germain, Vinitha Macwan, Audrey Astori, Andy G.X. Zeng, Jun Young Hong, Meng Li, Min Yang, Sadhan Jana, John E. Dick, Hening Lin, Ari Melnick, Anastasia N Tikhonova, Andrea Arruda, Mark D. Minden, Brian Raught, Angelo D'Alessandro, Courtney L Jones
Journal: Blood
Blood (2022) 140 (Supplement 1): 104–106.
https://doi.org/10.1182/blood-2022-157794
Published: 2022
Journal Articles

A Novel Role for PLK1 in Leukemia Stem Cell Function in Acute Myeloid Leukemia

Qiang Liu, Alex Murison, Andy G.X. Zeng, Changjiang Xu, Veronique Voisin, Faith Yeung, Amit Subedi, Steven M. Chan, Brian Raught, Gary D Bader, John E. Dick, Jean C.Y. Wang
Journal: Blood
Blood (2022) 140 (Supplement 1): 5920–5921.
https://doi.org/10.1182/blood-2022-169732
Published: 2022
Journal Articles

Discovery of a New Human Hematopoietic Stem Cell Involved with Aging That Retains Memory of Immune Activation

Andy G.X. Zeng, Murtaza S Nagree, Alexander Murison, Isabel Lim, Sayyam Shah, Alicia Aguilar-Navarro, Joana Araújo, Darrien Parris, Jessica L McLeod, Liqing Jin, Elvin Wagenblast, Eugenia Flores-Figueroa, John E. Dick, Stephanie Z Xie
Journal: Blood
Blood (2022) 140 (Supplement 1): 2218–2219.
https://doi.org/10.1182/blood-2022-170303
Published: 2022
Journal Articles

Deep Multi-Omics Profiling in Cytogenetically Poor-Risk AML

Ana Rio-Machin, Findlay Bewicke-Copley, Jiexin Zheng, Pedro Casado Izquierdo, Juho J. Miettinen, Naeem Khan, Jonas Demeulemeester, Szilvia Krizsán, Christopher Middleton, Sam Benkwitz-Bedford, Joseph Saad, Amaia Vilas-Zornoza, Teresa Ezponda, William Grey, Vincent-Philippe Lavallée, Alexis Nolin-Lapalme, Farideh Miraki-Moud, Janet Matthews, Marianne Grantham, Ryan J Colm, Jonathan Bond, Doriana Di Bella, Krister Wennerberg, Alun Parsons, Andy G.X. Zeng, Hannah Armes, Karina Close, Fadimana Kaya, Kevin Rouault-Pierre, John G. Gribben, Felipe Prosper, James Cavenagh, John E. Dick, Sylvie D Freeman, Peter Van Loo, Csaba Bödör, Guy Sauvageau, Kimmo Porkka, Caroline A. Heckman, Jun Wang, Jean-Baptiste Cazier, David Taussig, Dominique Bonnet, Pedro Cutillas, Jude Fitzgibbon
Journal: Blood
Blood (2022) 140 (Supplement 1): 1030–1032.
https://doi.org/10.1182/blood-2022-159069
Published: 2022
Journal Articles

KDM6 Demethylases Integrate DNA Repair Gene Regulation: Loss of KDM6A Sensitizes AML to PARP Inhibition and Potentiates with BCL2 Blockade

Liberalis Debraj Boila, Liqing Jin, Alex Murison, Subham K. Bandyopadhyay, Subhadeep Ghosh, Siva Sai Naga Anurag Muddineni, Andy G.X. Zeng, Sayantani Sinha, Shankha Subhra Chatterjee, Mayukh Biswas, Nathan Mbong, Olga I. Gan, Andrea Arruda, Wasim Shaikh, Anwesha Bose, Satyaki Bhowmik, Sayan Chakraborty, James A. Kennedy, Amanda Mitchell, Eric R. Lechman, Debasis Banerjee, Michael Milyavsky, Mark D. Minden, John E. Dick, Amitava Sengupta
Journal: Blood
Blood (2021) 138 (Supplement 1): 25.
https://doi.org/10.1182/blood-2021-145491
Published: 2021
Journal Articles

Variation in Stem Cell Driven Hierarchies Underlies Clinical Outcome and Drug Response in AML

Andy G.X. Zeng, BSc, Amanda Mitchell, PhD, Oleksandr Galkin, PhD, Jean C.Y. Wang, MD PhD, James A. Kennedy, MDPhD, John E. Dick, PhD FRS
Journal: Blood
Blood (2020) 136 (Supplement 1): 27–28.
https://doi.org/10.1182/blood-2020-140895
Published: 2020
Journal Articles

Divergent Levels of CD112 and INKA1 Define a Subset of Human Hematopoietic Stem Cells That Resists Regenerative Stress to Preserve Stemness

Kerstin B Kaufmann, PhD, Andy G.X. Zeng, BSc, Etienne Coyaud, Laura Garcia Prat, PhD BSc, MSc, Efthymia Papalexi, BA, Estelle MN Laurent, Michelle Chan-Seng-Yue, Olga I. Gan, PhD, Kristele Pan, Jessica L. McLeod, Sasan Zandi, Shin-Ichiro Takayanagi, PhD, Rahul Satija, Brian Raught, Stephanie Zhi-Juan Xie, PhD, John E. Dick, PhD FRS
Journal: Blood
Blood (2020) 136 (Supplement 1): 5.
https://doi.org/10.1182/blood-2020-137725
Published: 2020