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Journal Articles

Mapping Path Forward for Using the Generative AI for Comprehension of Prognostic Genesets Implicated in Hematologic Malignancies

Andrew Rech, Yury Goltsev, Nikolay Samusik, Henri Li, Garry P. Nolan, Carl H. June, Amol Jhala
Journal: Blood
Blood (2024) 144 (Supplement 1): 7521.
https://doi.org/10.1182/blood-2024-211865
Published: 2024
Journal Articles

Spatial Dissection of the Bone Marrow Microenvironment in Multiple Myeloma By High Dimensional Multiplex Tissue Imaging

Marc-Andrea Baertsch, Alexander Brobeil, John Hickey, Maximilian Haist, Alexandra Maria Poos, Guolan Lu, Wilson Kuswanto, Christian Schuerch, Harald Voehringer, Wolfgang Huber, Gunhild Mechtersheimer, Carsten Mueller-Tidow, Peter Schirmacher, Katja Weisel, Roland Fenk, Hartmut Goldschmidt, Yury Goltsev, Marc S. Raab, Niels Weinhold, Garry P. Nolan
Journal: Blood
Blood (2023) 142 (Supplement 1): 85.
https://doi.org/10.1182/blood-2023-189255
Published: 2023
Journal Articles

Improved Relapse Prediction in Pediatric Acute Myeloid Leukemia By Deconvolving Lineage-Specific and Cancer-Specific Features in Single-Cell Data

Timothy James Keyes, Astraea Jager, Michael Krueger, Sylvia Plevritis, Robert Tibshirani, Richard Aplenc, Garry P. Nolan, Michele S. Redell, Kara L. Davis
Journal: Blood
Blood (2022) 140 (Supplement 1): 6288–6289.
https://doi.org/10.1182/blood-2022-170939
Published: 2022
Journal Articles

Dynamics of the Cutaneous T Cell Lymphoma Microenvironment in Patients Treated with Pembrolizumab Revealed By Highly Multiplexed Tissue Imaging

Christian M. Schuerch, MD PhD, Darci J. Phillips, MD PhD, Salil S. Bhate, MMath, Graham L. Barlow, BA, Steven P Fling, PhD, Nirasha Ramchurren, Robert Pierce, MD, Martin A Cheever, MD, Michael S. Khodadoust, MD PhD, Youn H. Kim, MD, Garry P. Nolan, PhD
Journal: Blood
Blood (2019) 134 (Supplement_1): 1521.
https://doi.org/10.1182/blood-2019-125315
Published: 2019
Journal Articles

A topological view of human CD34 + cell state trajectories from integrated single-cell output and proteomic data

David J. H. F. Knapp, Colin A. Hammond, Fangwu Wang, Nima Aghaeepour, Paul H. Miller, Philip A. Beer, Davide Pellacani, Michael VanInsberghe, Carl Hansen, Sean C. Bendall, Garry P. Nolan, Connie J. Eaves
Journal: Blood
Blood (2019) 133 (9): 927–939.
https://doi.org/10.1182/blood-2018-10-878025
Published: 2019
Includes: Supplemental data
Journal Articles

Dynamics of the Bone Marrow Microenvironment during Leukemic Progression Revealed By Codex Hyper-Parameter Tissue Imaging

Christian Schuerch, MD PhD, Graham L. Barlow, BA, Salil S. Bhate, MMath, Nikolay Samusik, PhD, Garry P. Nolan, PhD, Yury Goltsev, PhD
Journal: Blood
Blood (2018) 132 (Supplement 1): 935.
https://doi.org/10.1182/blood-2018-99-111708
Published: 2018
Journal Articles

Glucocorticoids-Resistant Leukemic B-Cells Undergo a Phenotypic Change That Increases Sensitivity to SRC/ABL Inhibition

Jolanda Sarno, PhD, Christina Bligaard Pedersen, MSc, Astraea Jager, BS, Tyler Burns, PhD, Giuseppe Gaipa, PhD, Garry P. Nolan, PhD, Alessio Felice Bava, PhD, Kara L. Davis, DO
Journal: Blood
Blood (2018) 132 (Supplement 1): 1546.
https://doi.org/10.1182/blood-2018-99-117443
Published: 2018
Journal Articles

Distinct signaling programs control human hematopoietic stem cell survival and proliferation

David J. H. F. Knapp, Colin A. Hammond, Nima Aghaeepour, Paul H. Miller, Davide Pellacani, Philip A. Beer, Karen Sachs, Wenlian Qiao, WeiJia Wang, R. Keith Humphries, Guy Sauvageau, Peter W. Zandstra, Sean C. Bendall, Garry P. Nolan, Carl Hansen, Connie J. Eaves
Journal: Blood
Blood (2017) 129 (3): 307–318.
https://doi.org/10.1182/blood-2016-09-740654
Published: 2017
Includes: Supplemental data
Journal Articles

High Resolution Mapping of Human Lymphopoiesis Reveals a Common Lymphoid Progenitor (CLP) Population

Nivedita Shankar Saxena, BA, Kara L. Davis, DO, Matthew Arthur Inlay, PhD BA, Astraea Junger, Yujun Yang, Mark L. Krampf, MS, Beruh Dejene, Garry P. Nolan, Prof, PhD, Irving L Weissman, MD, Kenneth I. Weinberg, MD
Journal: Blood
Blood (2016) 128 (22): 1473.
https://doi.org/10.1182/blood.V128.22.1473.1473
Published: 2016
Journal Articles

JAK1 As a Convergent Regulator of Hematopoietic Stem Cell Function and Stress Hematopoiesis

Maria Kleppe, PhD, Matthew H Spitzer, PhD, Sheng Li, PhD, Lauren Dong, M.S., Efthymia Papalexi, Corinne Hill, M.S, Sofie De Groote, M.S., Matthew Keller, M.S., Priya Koppikar, PhD, Franck Rapaport, PhD, Jorge Gandara, Christopher E. Mason, PhD, Garry P. Nolan, Prof, PhD, Ross L. Levine, MD
Journal: Blood
Blood (2016) 128 (22): 722.
https://doi.org/10.1182/blood.V128.22.722.722
Published: 2016
Journal Articles

Mass Cytometry Analysis Dissects CRLF2-Driven Signaling Pathways in Childhood B-Cell Precursor Acute Lymphoblastic Leukemia (BCP-ALL)

Jolanda Sarno, Kara L. Davis, DO, Angela Maria Savino, PhD, Cristina Bugarin, Stefania Pinto, Chiara Buracchi, PhD, Astraea Jager, BS, Chiara Palmi, PhD, Ruth C Barber, PhD, Daniela Silvestri, Gianni Cazzaniga, PhD, Martin J.S. Dyer, Prof., Andrea Biondi, Prof, MD, Garry P. Nolan, Prof, PhD, Giuseppe Gaipa, PhD
Journal: Blood
Blood (2015) 126 (23): 906.
https://doi.org/10.1182/blood.V126.23.906.906
Published: 2015
Journal Articles

Increased Frequency of Cells with Activated Ribosomal Protein S6 at Diagnosis Associates with MRD Positivity and Relapse in Childhood BCP ALL

Kara L. Davis, DO, Jolanda Sarno, Andrea Biondi, Prof, MD, Astraea Jager, BS, Giuseppe Gaipa, PhD, Zinaida Good, Garry P. Nolan, Prof, PhD
Journal: Blood
Blood (2015) 126 (23): 2616.
https://doi.org/10.1182/blood.V126.23.2616.2616
Published: 2015
Journal Articles

Role of the Histone Deacetylase Inhibitor Givinostat (ITF2357) in Treatment of CRLF2 Rearranged Acute Lymphoblastic Leukemia

Angela Maria Savino, Jolanda Sarno, Luca Trentin, Margherita Vieri, Grazia Fazio, PhD, Michela Bardini, Cristina Bugarin, Gianluca Fossati, Kara L. Davis, DO, Giuseppe Gaipa, PhD, Lueder Hinrich Meyer, MD, Garry P. Nolan, Prof, PhD, Andrea Biondi, Prof, MD, Geertruy Te Kronnie, PhD, Chiara Palmi, PhD, Giovanni Cazzaniga
Journal: Blood
Blood (2015) 126 (23): 2534.
https://doi.org/10.1182/blood.V126.23.2534.2534
Published: 2015
Journal Articles

Profiling Myelodysplastic Syndromes By Mass Cytometry Demonstrates Distinct Immunophenotypic Aberrancies in Stem and Progenitor Populations

Gregory K. Behbehani, MD PhD, Rachel Finck, B.S., Nikolay Samusik, PhD, Pier Federico Gherardini, PhD, Kunju J Sridhar, PhD, Wendy J. Fantl, PhD, Peter L. Greenberg, MD, Garry P. Nolan, PhD
Journal: Blood
Blood (2014) 124 (21): 1903.
https://doi.org/10.1182/blood.V124.21.1903.1903
Published: 2014
Journal Articles

Single Cell Developmental Classification of B Cell Precursor Acute Lymphoblastic Leukemia (BCP ALL) Reveals Link Between Phenotype, Signaling, and Drug Response

Kara L. Davis, DO, Nikolay Samusik, PhD, Astraea Jager, Sean C. Bendall, PhD, Erin F. Simonds, PhD, Wendy J. Fantl, PhD, Garry P. Nolan, PhD
Journal: Blood
Blood (2014) 124 (21): 488.
https://doi.org/10.1182/blood.V124.21.488.488
Published: 2014
Journal Articles

Mass Cytometric Analysis of AML Stem and Early Progenitor Cells Reveals Karyotype and Genotype-Specific Cell Cycle Properties That Correlate with Known Responses to Chemotherapy

Gregory K. Behbehani, MD PhD, Wendy J. Fantl, PhD, Bruno C Medeiros, MD, Garry P. Nolan, PhD
Journal: Blood
Blood (2014) 124 (21): 2359.
https://doi.org/10.1182/blood.V124.21.2359.2359
Published: 2014
Journal Articles

Mass Cytometric Analysis of AML Stem and Early Progenitor Cells Reveals Karyotype and Genotype-Specific Immunophenotypes That May Represent Targets for Antibody-Directed Therapies

Gregory K. Behbehani, MD PhD, Wendy J. Fantl, PhD, Bruno C Medeiros, MD, Garry P. Nolan, PhD
Journal: Blood
Blood (2014) 124 (21): 2380.
https://doi.org/10.1182/blood.V124.21.2380.2380
Published: 2014
Journal Articles

Single Cell Mass Cytometry Reveals Hyperactivated Signaling Networks in Myeloproliferative Neoplasms

Daniel A.C. Fisher, PhD, Olga Malkova, Mary C. Fulbright, Gregory K. Behbehani, MD PhD, Garry P. Nolan, PhD, Stephen T. Oh, MD PhD
Journal: Blood
Blood (2014) 124 (21): 1884.
https://doi.org/10.1182/blood.V124.21.1884.1884
Published: 2014
Journal Articles

NRAS G12V oncogene facilitates self-renewal in a murine model of acute myelogenous leukemia

Zohar Sachs, Rebecca S. LaRue, Hanh T. Nguyen, Karen Sachs, Klara E. Noble, Nurul Azyan Mohd Hassan, Ernesto Diaz-Flores, Susan K. Rathe, Aaron L. Sarver, Sean C. Bendall, Ngoc A. Ha, Miechaleen D. Diers, Garry P. Nolan, Kevin M. Shannon, David A. Largaespada
Journal: Blood
Blood (2014) 124 (22): 3274–3283.
https://doi.org/10.1182/blood-2013-08-521708
Published: 2014
Includes: Supplemental data
Journal Articles

Mass Cytometry Analysis Of Myelofibrosis and Secondary Acute Myeloid Leukemia Reveals Constitutive and Cytokine Induced Signaling Abnormalities With Differential Sensitivities To Ruxolitinib

Daniel A.C. Fisher, PhD, Gregory K. Behbehani, MD, PhD, Garry P. Nolan, PhD, Sean C. Bendall, PhD, Stephen T. Oh, MD, PhD
Journal: Blood
Blood (2013) 122 (21): 1610.
https://doi.org/10.1182/blood.V122.21.1610.1610
Published: 2013