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Amy L. Donahue
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Journal Articles

Integrated genomic DNA/RNA profiling of hematologic malignancies in the clinical setting

Jie He, Omar Abdel-Wahab, Michelle K. Nahas, Kai Wang, Raajit K. Rampal, Andrew M. Intlekofer, Jay Patel, Andrei Krivstov, Garrett M. Frampton, Lauren E. Young, Shan Zhong, Mark Bailey, Jared R. White, Steven Roels, Jason Deffenbaugh, Alex Fichtenholtz, Timothy Brennan, Mark Rosenzweig, Kimberly Pelak, Kristina M. Knapp, Kristina W. Brennan, Amy L. Donahue, Geneva Young, Lazaro Garcia, Selmira T. Beckstrom, Mandy Zhao, Emily White, Vera Banning, Jamie Buell, Kiel Iwanik, Jeffrey S. Ross, Deborah Morosini, Anas Younes, Alan M. Hanash, Elisabeth Paietta, Kathryn Roberts, Charles Mullighan, Ahmet Dogan, Scott A. Armstrong, Tariq Mughal, Jo-Anne Vergilio, Elaine Labrecque, Rachel Erlich, Christine Vietz, Roman Yelensky, Philip J. Stephens, Vincent A. Miller, Marcel R. M. van den Brink, Geoff A. Otto, Doron Lipson, Ross L. Levine
Journal: Blood
Blood (2016) 127 (24): 3004–3014.
https://doi.org/10.1182/blood-2015-08-664649
Published: 2016
Includes: Supplemental data
Journal Articles

Genomic Analysis of Serial Samples from CLL Patients Identifies Clonal Events Associated with Disease Progression

Jeffrey R Gardner, BS, MBA, Michelle Nahas, PhD, Jie He, PhD, Shlomzion Aumann, Mithat Gonen, Minal Patel, Kristina M. Knapp, BS, Maria Lia Palomba, MD, Roman Yelensky, PhD, Amy L Donahue, MS, Geoff Otto, PhD, Maria Arcila, MD, Nicole Lamanna, Mark G. Frattini, MD PhD, Ahmet Dogan, MD PhD, Jae H Park, MD, Doron Lipson, PhD, Martin S. Tallman, MD, Ross L. Levine, MD, Philip J. Stephens, PhD, Marcel R. M. van den Brink, MD PhD, Mark L Heaney, MD PhD, Vincent A. Miller, MD, Andrew D. Zelenetz, MD PhD, Omar Abdel-Wahab, MD
Journal: Blood
Blood (2014) 124 (21): 1954.
https://doi.org/10.1182/blood.V124.21.1954.1954
Published: 2014
Journal Articles

Clinical Utility of Comprehensive Profiling of Genomic Alterations in Hematologic Malignancies

Jie He, PhD, Jose A. Bufill, MD, Michelle K. Nahas, PhD, Kai Wang, MDPhD, Lauren E Young, MS, Kristina M. Knapp, Kristina W. Brennan, BS, Amy L Donahue, MS, Geneva Young, BS, Jeffrey S Ross, MD, Deborah Morosini, MD, Marcel R. M. van den Brink, MD PhD, Omar Abdel-Wahab, MD, Raajit K. Rampal, MD PhD, Andrew M. Intlekofer, MD PhD, Ahmet Dogan, MD PhD, Scott Armstrong, MD PhD, Roman Yelensky, PhD, Geoff Otto, PhD, Doron Lipson, PhD, Philip J. Stephens, PhD, Vincent A. Miller, MD, Ross L. Levine, MD
Journal: Blood
Blood (2014) 124 (21): 1072.
https://doi.org/10.1182/blood.V124.21.1072.1072
Published: 2014
Journal Articles

Extensive High-Depth Sequencing Of Longitudinal CLL Samples Identifies Frequent Mutations In MAP Kinase Signaling and Novel Mutations Activating Notch and Beta-Catenin

Jeffrey R Gardner, MBA, Michelle K. Nahas, PhD, Jie He, PhD, Minal Patel, Kristina M. Knapp, BS, M. Lia Palomba, MD, Roman Yelensky, PhD, Amy L Donahue, MS, Geoff A. Otto, PhD, Maria Arcila, MD, Ahmet Dogan, MD, PhD, Jae H Park, MD, Andrew D. Zelenetz, MD, PhD, Doron Lipson, PhD, Martin S. Tallman, MD, Ross L. Levine, MD, Philip J. Stephens, PhD, Marcel R. M. van den Brink, MD, PhD, Vincent A. Miller, MD, Mark L Heaney, MD, PhD, Omar Abdel-Wahab, MD
Journal: Blood
Blood (2013) 122 (21): 2858.
https://doi.org/10.1182/blood.V122.21.2858.2858
Published: 2013
Journal Articles

Patient Derived Xenograft (PDX) Models Faithfully Recapitulate The Genetic Composition Of Primary AML

Andrei V. Krivtsov, PhD, Wang Xujun, MD, Noushin Rahnamay Farnoud, PhD, Michael Hadler, MSc, Kristina M. Knapp, BS, Eytan M Stein, MD, Martin S. Tallman, MD, Amy L Donahue, MS, Doron Lipson, PhD, Michelle K. Nahas, PhD, Philip J. Stephens, PhD, Eric M Sanford, BS, Kai Wang, MD PhD, Garrett M Frampton, PhD, Tim Brennan, PhD, Geoff A. Otto, PhD, Roman Yelensky, PhD, Vincent A. Miller, MD, Ross L. Levine, MD, Scott A. Armstrong, MD, PhD
Journal: Blood
Blood (2013) 122 (21): 1328.
https://doi.org/10.1182/blood.V122.21.1328.1328
Published: 2013
Journal Articles

Identification Of Actionable Genomic Alterations In Hematologic Malignancies By a Clinical Next Generation Sequencing-Based Assay

Doron Lipson, PhD, Michelle K Nahas, PhD, Geoff A. Otto, PhD, Roman Yelensky, PhD, Omar Abdel-Wahab, MD, Kai Wang, MD PhD, Jie He, PhD, Andrew M. Intlekofer, MD, PhD, Raajit K. Rampal, M.D., Ph.D., Timothy A Brennan, MS, Kristina M. Knapp, BS, Kristina W Brennan, BS, Geneva Young, BS, Amy L Donahue, MS, Eric M Sanford, BS, Joel R Greenbowe, BS, Garrett M Frampton, PhD, Alex Fichtenholtz, PhD, Lauren E Young, MS, Rachel L Erlich, PhD, Alex Parker, PhD, David Klimstra, Ahmet Dogan, MD, PhD, Jeffrey S Ross, MD, Scott A. Armstrong, MD, PhD, Philip J. Stephens, PhD, Marcel R. M. van den Brink, MD, PhD, Vincent A. Miller, MD, Ross L. Levine, MD
Journal: Blood
Blood (2013) 122 (21): 230.
https://doi.org/10.1182/blood.V122.21.230.230
Published: 2013
Journal Articles

Overview Of The Genomic Landscape Of High Risk Diffuse Large B-Cell Lymphoma Using Targeted DNA and RNA Sequencing

Kai Wang, MD PhD, Michelle Nahas, PhD, Anthony R Mato, MD, MSCE, Amy L Donahue, MS, Jie He, PhD, Geoff A Otto, PhD, Doron Lipson, PhD, Roman Yelensky, PhD, Jeff Ross, MD, Phil Stephens, PhD, Kar Fai Chow, MD, Tania Zielonka, Pritish K. Bhattacharyya, MD, Ewelina Protomastro, BS, Tatyana Feldman, MD, Andrew L. Pecora, MD, Vincent Miller, MD, Andre Goy, MD
Journal: Blood
Blood (2013) 122 (21): 501.
https://doi.org/10.1182/blood.V122.21.501.501
Published: 2013