• Splicing factor gene mutations are enriched in older patients with AML and in those with secondary AML.

  • The use of venetoclax with LI or intensive therapies abrogates any negative prognostic impact of these mutations on survival.

Mutations in splicing factor (SF) genes SRSF2, U2AF1, SF3B1, and ZRSR2 are now considered adverse risk in the European LeukemiaNet 2022 acute myeloid leukemia (AML) risk stratification. The prognostic impact of SF mutations in AML has been predominantly derived from younger patients treated with intensive (INT) therapy. We evaluated 994 patients with newly diagnosed AML, including 266 (27%) with a SFmut. Median age was 67 years overall, with patients with SFmut being older at 72 years. SRSF2 (n = 140, 53%) was the most common SFmut. In patients treated with INT, median relapse-free survival (RFS) (9.6 vs 21.4 months, P = .04) and overall survival (OS) (15.9 vs 26.7 months, P = .06) were shorter for patients with SFmut than without SFwt, however this significance abrogated when evaluating patients who received venetoclax with INT therapy (RFS 15.4 vs 20.3 months, P = .36; OS 19.6 vs 30.7 months, P = .98). In patients treated with LI, median RFS (9.3 vs 7.7 months, P = .35) and OS (12.3 vs 8.5 months, P = .14) were similar for patients with and without SFmut , and outcomes improved in all groups with venetoclax. On multivariate analysis, SFmut did not affect hazards of relapse and death for INT arm but reduced both these hazards in LI arm. In a large AML data set with >60% of patients receiving venetoclax with LI/INT therapy, SFmut had no independent negative prognostic impact. Newer prognostic models that consider LI therapy and use of venetoclax among other factors are warranted.

1.
Saez
B
,
Walter
MJ
,
Graubert
TA
.
Splicing factor gene mutations in hematologic malignancies
.
Blood
.
2017
;
129
(
10
):
1260
-
1269
.
2.
Lee
H
,
Palm
J
,
Grimes
SM
,
Ji
HP
.
The Cancer Genome Atlas Clinical Explorer: a web and mobile interface for identifying clinical–genomic driver associations
.
Genome Med
.
2015
;
7
(
1
):
112
.
3.
Papaemmanuil
E
,
Cazzola
M
,
Boultwood
J
, et al;
Chronic Myeloid Disorders Working Group of the International Cancer Genome Consortium
.
Somatic SF3B1 mutation in myelodysplasia with ring sideroblasts
.
N Engl J Med
.
2011
;
365
(
15
):
1384
-
1395
.
4.
Pellagatti
A
,
Armstrong
RN
,
Steeples
V
, et al
.
Impact of spliceosome mutations on RNA splicing in myelodysplasia: dysregulated genes/pathways and clinical associations
.
Blood
.
2018
;
132
(
12
):
1225
-
1240
.
5.
Urrutia
S
,
Li
Z
,
Almanza
E
, et al
.
Characteristics of patients with myelodysplastic neoplasm and spliceosome mutations
.
Leukemia
.
2023
;
37
(
6
):
1397
-
1400
.
6.
Papaemmanuil
E
,
Gerstung
M
,
Bullinger
L
, et al
.
Genomic classification and prognosis in acute myeloid leukemia
.
N Engl J Med
.
2016
;
374
(
23
):
2209
-
2221
.
7.
Tazi
Y
,
Arango-Ossa
JE
,
Zhou
Y
, et al
.
Unified classification and risk-stratification in acute myeloid leukemia
.
Nat Commun
.
2022
;
13
(
1
):
4622
.
8.
Hou
HA
,
Liu
CY
,
Kuo
YY
, et al
.
Splicing factor mutations predict poor prognosis in patients with de novo acute myeloid leukemia
.
Oncotarget
.
2016
;
7
(
8
):
9084
-
9101
.
9.
van der Werf
I
,
Wojtuszkiewicz
A
,
Meggendorfer
M
, et al
.
Splicing factor gene mutations in acute myeloid leukemia offer additive value if incorporated in current risk classification
.
Blood Adv
.
2021
;
5
(
17
):
3254
-
3265
.
10.
Döhner
H
,
Wei
AH
,
Appelbaum
FR
, et al
.
Diagnosis and management of AML in adults: 2022 recommendations from an international expert panel on behalf of the ELN
.
Blood
.
2022
;
140
(
12
):
1345
-
1377
.
11.
DiNardo
CD
,
Jonas
BA
,
Pullarkat
V
, et al
.
Azacitidine and venetoclax in previously untreated acute myeloid leukemia
.
N Engl J Med
.
2020
;
383
(
7
):
617
-
629
.
12.
Wei
AH
,
Montesinos
P
,
Ivanov
V
, et al
.
Venetoclax plus LDAC for newly diagnosed AML ineligible for intensive chemotherapy: a phase 3 randomized placebo-controlled trial
.
Blood
.
2020
;
135
(
24
):
2137
-
2145
.
13.
Lachowiez
CA
,
Loghavi
S
,
Furudate
K
, et al
.
Impact of splicing mutations in acute myeloid leukemia treated with hypomethylating agents combined with venetoclax
.
Blood Adv
.
2021
;
5
(
8
):
2173
-
2183
.
14.
Kadia
TM
,
Reville
PK
,
Borthakur
G
, et al
.
Venetoclax plus intensive chemotherapy with cladribine, idarubicin, and cytarabine in patients with newly diagnosed acute myeloid leukaemia or high-risk myelodysplastic syndrome: a cohort from a single-centre, single-arm, phase 2 trial
.
Lancet Haematol
.
2021
;
8
(
8
):
e552
-
e561
.
15.
Döhner
H
,
Estey
E
,
Grimwade
D
, et al
.
Diagnosis and management of AML in adults: 2017 ELN recommendations from an international expert panel
.
Blood
.
2017
;
129
(
4
):
424
-
447
.
16.
Lachowiez
CA
,
Reville
PK
,
Kantarjian
H
, et al
.
Venetoclax combined with induction chemotherapy in patients with newly diagnosed acute myeloid leukaemia: a post-hoc, propensity score-matched, cohort study
.
Lancet Haematol
.
2022
;
9
(
5
):
e350
-
e360
.
17.
Lindsley
RC
,
Mar
BG
,
Mazzola
E
, et al
.
Acute myeloid leukemia ontogeny is defined by distinct somatic mutations
.
Blood
.
2015
;
125
(
9
):
1367
-
1376
.
18.
Patel
AA
,
Yoon
JJ
,
Johnston
H
, et al
.
Outcomes of patients with accelerated/blast-phase myeloproliferative neoplasms in the current era of myeloid therapies
.
Blood
.
2022
;
140
(
suppl 1
):
6860
-
6862
.
19.
Senapati
J
,
Verstovsek
S
,
Masarova
L
, et al
.
Impact of SF3B1 mutation in myelofibrosis
.
Leuk Lymphoma
.
2022
;
63
(
11
):
2701
-
2705
.
20.
Wang
E
,
Pineda
JMB
,
Kim
WJ
, et al
.
Modulation of RNA splicing enhances response to BCL2 inhibition in leukemia
.
Cancer Cell
.
2023
;
41
(
1
):
164
-
180.e8
.
21.
Ganan-Gomez
I
,
Yang
H
,
Ma
F
, et al
.
Stem cell architecture drives myelodysplastic syndrome progression and predicts response to venetoclax-based therapy
.
Nat Med
.
2022
;
28
(
3
):
557
-
567
.
22.
Short
NJ
,
Tallman
MS
,
Pollyea
DA
,
Ravandi
F
,
Kantarjian
H
.
Optimizing risk stratification in acute myeloid leukemia: dynamic models for a dynamic therapeutic landscape
.
J Clin Oncol
.
2021
;
39
(
23
):
2535
-
2538
.
23.
Döhner
H
,
Pratz
KW
,
DiNardo
CD
, et al
.
ELN risk stratification is not predictive of outcomes for treatment-naïve patients with acute myeloid leukemia treated with venetoclax and azacitidine
.
Blood
.
2022
;
140
(
suppl 1
):
1441
-
1444
.
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