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Journal Articles

B- and T-cell clonality using peripheral blood cell-free RNA (cfRNA) in liquid biopsy

Adam Albitar, Alfonso Lam, Sally Agersborg, Ahmad Charifa, Pooja Phull, Noa Biran, David Vesole, Harsh Parmar, Andrew Pecora, Andrew Ip, Andre Goy, David Siegel, Maher Albitar

Blood (2025) 146 (Supplement 1): 1754.

https://doi.org/10.1182/blood-2025-1754

Published: 2025

Journal Articles

Developing transcriptomic signature for IDH1 and IDH2 acute leukemia and the demonstration of high prevalence of these signatures in mutation-negative leukemia

Maher Albitar, Hong Zhang, Gustavo Rivero, David Swoboda, Sally Agersborg, Adam Albitar, Ahmad Charifa, Andrew Ip, Andre Goy, Andrew Pecora, David Siegel, Kelly West Fitzpatrick, Katherine Linder, Jamie Koprivnikar, James McCloskey

Blood (2025) 146 (Supplement 1): 5251.

https://doi.org/10.1182/blood-2025-5251

Published: 2025

Journal Articles

Bone marrow microenvironment overlap between vexas and myelodysplastic syndrome demonstrated by targeted transcriptomic and artificial intelligence

Maher Albitar, Sally Agersborg, Hong Zhang, Adam Albitar, Ahmad Charifa, Andrew Pecora, David Siegel, Andre Goy, Jamie Koprivnikar, James McCloskey, Katherine Linder

Blood (2025) 146 (Supplement 1): 5611.

https://doi.org/10.1182/blood-2025-5611

Published: 2025

Journal Articles

Developing artificial intelligence-based transcriptomic signature for selecting patients with HOXA-MEIS1 pathway abnormalities for the treatment with menin inhibitors

Blood (2025) 146 (Supplement 1): 3471.

https://doi.org/10.1182/blood-2025-3471

Published: 2025

Journal Articles

Developing artificial intelligence-based transcriptomic signature for the diagnosis of dark zone lymphoma in patients without MYC gene rearrangement

Andrew Ip, Maher Albitar, Hong Zhang, Sally Agersborg, Adam Albitar, Ahmad Charifa, Andrew Pecora, David Siegel, Lori Leslie, Andre Goy, Tatyana Feldman

Blood (2025) 146 (Supplement 1): 3525.

https://doi.org/10.1182/blood-2025-3525

Published: 2025

Journal Articles

Establishing a Distinct Cytokine Signature for Multiple Myeloma Using Bone Marrow RNA and Peripheral Blood Cell-Free RNA (cfRNA)

Maher Albitar, Hong Zhang, Sally Agersborg, Ahmad Charifa, Pooja Phull, Noa Biran, David H. Vesole, Harsh Parmar, Andrew L Pecora, Andrew Ip, Andre Goy, David S. Siegel

Blood (2024) 144 (Supplement 1): 3316.

https://doi.org/10.1182/blood-2024-203774

Published: 2024

Journal Articles

Establishing Lymphoma Type-Specific Cytokine Signatures Using Tissue-Based RNA or Peripheral Blood Cell-Free RNA (cfRNA)

Maher Albitar, Hong Zhang, Sally Agersborg, Ahmad Charifa, Andrew L Pecora, Lori A. Leslie, Tatyana Feldman, Andrew Ip, Andre Goy

Blood (2024) 144 (Supplement 1): 4367.

https://doi.org/10.1182/blood-2024-203834

Published: 2024

Journal Articles

Establishing Distinct Cytokine Signatures Differentiating between Acute Myeloid Leukemia, Myelodysplastic Syndrome, and Chip Using Bone Marrow RNA or Cell-Free RNA (cfRNA)

Maher Albitar, Sally Agersborg, Ahmad Charifa, Hong Zhang, Andrew Ip, Katherine Linder, Andrew L Pecora, Jamie Koprivnikar, Andre Goy, James McCloskey

Blood (2024) 144 (Supplement 1): 4295.

https://doi.org/10.1182/blood-2024-203870

Published: 2024

Journal Articles

Clonotype-Naïve Detection of Clonality in Patients Suspected of Having Multiple Myeloma or Monoclonal Gammopathy Using Peripheral Blood Cell-Free RNA (cfRNA)

Maher Albitar, Hong Zhang, Sally Agersborg, Ahmad Charifa, Pooja Phull, Noa Biran, David H. Vesole, Harsh Parmar, Andrew L Pecora, Andrew Ip, Andre Goy, David S. Siegel

Blood (2024) 144 (Supplement 1): 1946.

https://doi.org/10.1182/blood-2024-201810

Published: 2024

Journal Articles

Detection of PAX5 Overexpression By RNA-Seq for B-Cell Lineage Detection in Acute Lymphocytic Leukemia

Abhisek Ghosal, Francys Alarcon, Samuel Koo, Soo Jin Kang, Archana Ramesh, Tibor Gyuris, Segun C Jung, Brad B Thomas, Rudy Fabunan, Christophe Magnan, Hyunjun Nam, Paris Petersen, Fernando Lopez-Diaz, Ryan Bender, Sally Agersborg, Fei Ye, Vincent Funari

Blood (2021) 138 (Supplement 1): 4925.

https://doi.org/10.1182/blood-2021-154043

Published: 2021

Journal Articles

Accurate Prediction of Chromosome-Level CNVs from Targeted NGS

Hyunjun Nam, Christophe Magnan, Fernando Lopez-Diaz, Ryan Bender, Sally Agersborg, Segun C Jung, Vincent Funari

Blood (2021) 138 (Supplement 1): 3994.

https://doi.org/10.1182/blood-2021-150911

Published: 2021

Journal Articles

Detection of CCND1 Overexpression By RNA-Seq from Tna Samples As a Surrogate for t(11:14) Translocation Traditionally Measured By FISH in Multiple Myeloma Patients for Improved Patient Care

Abhisek Ghosal, Francys Alarcon, Samuel Koo, Soo Jin Kang, Archana Ramesh, Tibor Gyuris, Segun C Jung, Brad B Thomas, Rudy Fabunan, Christophe Magnan, Hyunjun Nam, Paris Petersen, Fernando Lopez-Diaz, Susan Yamahata, Ryan Bender, Sally Agersborg, Fei Ye, Vincent Funari

Blood (2021) 138 (Supplement 1): 2961.

https://doi.org/10.1182/blood-2021-153253

Published: 2021

Journal Articles

A Novel NGS-Based Simultaneous Detection of DNA and RNA Biomarkers Using Total Nucleic Acid (TNA) for Acute Lymphocytic Leukemia (ALL)

Archana Ramesh, Samuel Koo, Soo Jin Kang, Abhisek Ghosal, Francys Alarcon, Tibor Gyuris, Segun C Jung, Christophe Magnan, Hyunjun Nam, Brad B Thomas, Rudy Fabunan, Paris Petersen, Fernando Lopez-Diaz, Ryan Bender, Sally Agersborg, Fei Ye, Vincent Funari

Blood (2021) 138 (Supplement 1): 1875.

https://doi.org/10.1182/blood-2021-148012

Published: 2021

Journal Articles

A Highly Sensitive and Specific Gene Fusion Algorithm Based on Multiple Fusion Callers and an Ensemble Machine Learning Approach

Brad B Thomas, Yanglong Mou, PhD, Lauryn Keeler, Christophe Magnan, PhD, Vincent Funari, PhD, Lawrence Weiss, MD, Shari Brown, MD, Sally Agersborg, MD PhD

Blood (2020) 136 (Supplement 1): 12–13.

https://doi.org/10.1182/blood-2020-142020

Published: 2020

Journal Articles

A Novel Multimodal Next Generation Sequencing Assay with Total Nucleic Acid Input to Provide Comprehensive Genomic Profiling for Hematologic Malignancies

Yongxin Yu, Francys Alarcon, Yanglong Mou, PhD, Segun C Jung, PhD, Hyunjun Nam, PhD, Brad Thomas, Lauryn Keeler, Eve Shinbrot, PhD, Christophe Magnan, PhD, Tessa Weiss, Ryan Bender, PhD FACMGG, Shi-Ping Jiang, MD PhD, Sally Agersborg, MD PhD, Lawrence Weiss, MD, Fei Ye, PhD, Vincent Funari, PhD

Blood (2020) 136 (Supplement 1): 29–30.

https://doi.org/10.1182/blood-2020-140460

Published: 2020

Journal Articles

Accessing Genomic Alternations in Chronic Lymphocytic Leukemia Using an NGS-Based Comprehensive Genomic Profiling Assay

Segun C Jung, PhD, Maya Thangavelu, PhD, Hyunjun Nam, PhD, Ryan Bender, PhD FACMGG, Sally Agersborg, MD PhD, Lawrence Weiss, MD, Vincent Funari, PhD

Blood (2020) 136 (Supplement 1): 8.

https://doi.org/10.1182/blood-2020-141690

Published: 2020

Journal Articles

Clonal Hematopoiesis in Normal Individuals Is Not Random and Likely Reflects Early MDS

Wanlong Ma, MS, Ivan De Dios, BS, Vincent Funari, PhD, Sucha Sudarsanam, MS, Shi-Ping Jiang, MD, Sally Agersborg, MD PhD, Jennifer Hummel, MD MPH, Forrest Blocker, PhD, Maher Albitar, MD

Blood (2017) 130 (Supplement 1): 4269.

https://doi.org/10.1182/blood.V130.Suppl_1.4269.4269

Published: 2017

Journal Articles

Liquid Biopsy As a Diagnostic Test for Myelodysplastic Syndrome and Other Acute and Chronic Myeloid Neoplasms

Wanlong Ma, MS, Ivan De Dios, BS, Vincent Funari, PhD, Shi-Ping Jiang, MD, Sally Agersborg, MD PhD, Jennifer Hummel, MD MPH, Forrest Blocker, PhD, Maher Albitar, MD

Blood (2017) 130 (Supplement 1): 4270.

https://doi.org/10.1182/blood.V130.Suppl_1.4270.4270

Published: 2017

Journal Articles

Potential Familial Predisposition to Hematologic Neoplasm Detected Incidentally in Adult Patients Presenting with Myeloid Neoplasms

Vincent Funari, PhD, Maya Thangavelu, PhD, Wanlong Ma, MS, Ivan De Dios, BS, Sally Agersborg, MD PhD, Forrest Blocker, PhD, Maher Albitar, MD

Blood (2017) 130 (Supplement 1): 585.

https://doi.org/10.1182/blood.V130.Suppl_1.585.585

Published: 2017

Journal Articles

FLT3 Mutation in Acute Myeloid Leukemia: Primary or Secondary Mutation?

Wanlong Ma, MS, Ivan De Dios, BS, Vincent Funari, PhD, Sucha Sudarsanam, MS, Shi-Ping Jiang, MD, Sally Agersborg, MD PhD, Jennifer Hummel, MD MPH, Forrest Blocker, PhD, Maher Albitar, MD

Blood (2017) 130 (Supplement 1): 2668.

https://doi.org/10.1182/blood.V130.Suppl_1.2668.2668

Published: 2017

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B- and T-cell clonality using peripheral blood cell-free RNA (cfRNA) in liquid biopsy

Developing transcriptomic signature for IDH1 and IDH2 acute leukemia and the demonstration of high prevalence of these signatures in mutation-negative leukemia

Bone marrow microenvironment overlap between vexas and myelodysplastic syndrome demonstrated by targeted transcriptomic and artificial intelligence

Developing artificial intelligence-based transcriptomic signature for selecting patients with HOXA-MEIS1 pathway abnormalities for the treatment with menin inhibitors

Developing artificial intelligence-based transcriptomic signature for the diagnosis of dark zone lymphoma in patients without MYC gene rearrangement

Establishing a Distinct Cytokine Signature for Multiple Myeloma Using Bone Marrow RNA and Peripheral Blood Cell-Free RNA (cfRNA)

Establishing Lymphoma Type-Specific Cytokine Signatures Using Tissue-Based RNA or Peripheral Blood Cell-Free RNA (cfRNA)

Establishing Distinct Cytokine Signatures Differentiating between Acute Myeloid Leukemia, Myelodysplastic Syndrome, and Chip Using Bone Marrow RNA or Cell-Free RNA (cfRNA)

Clonotype-Naïve Detection of Clonality in Patients Suspected of Having Multiple Myeloma or Monoclonal Gammopathy Using Peripheral Blood Cell-Free RNA (cfRNA)

Detection of PAX5 Overexpression By RNA-Seq for B-Cell Lineage Detection in Acute Lymphocytic Leukemia

Accurate Prediction of Chromosome-Level CNVs from Targeted NGS

Detection of CCND1 Overexpression By RNA-Seq from Tna Samples As a Surrogate for t(11:14) Translocation Traditionally Measured By FISH in Multiple Myeloma Patients for Improved Patient Care

A Novel NGS-Based Simultaneous Detection of DNA and RNA Biomarkers Using Total Nucleic Acid (TNA) for Acute Lymphocytic Leukemia (ALL)

A Highly Sensitive and Specific Gene Fusion Algorithm Based on Multiple Fusion Callers and an Ensemble Machine Learning Approach

A Novel Multimodal Next Generation Sequencing Assay with Total Nucleic Acid Input to Provide Comprehensive Genomic Profiling for Hematologic Malignancies

Accessing Genomic Alternations in Chronic Lymphocytic Leukemia Using an NGS-Based Comprehensive Genomic Profiling Assay

Clonal Hematopoiesis in Normal Individuals Is Not Random and Likely Reflects Early MDS

Liquid Biopsy As a Diagnostic Test for Myelodysplastic Syndrome and Other Acute and Chronic Myeloid Neoplasms

Potential Familial Predisposition to Hematologic Neoplasm Detected Incidentally in Adult Patients Presenting with Myeloid Neoplasms

FLT3 Mutation in Acute Myeloid Leukemia: Primary or Secondary Mutation?

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American Society of Hematology

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