Figure 2.
Validation of candidate genes modulating ALK TKI sensitivity in ALCL patients. (A) Schema of the treatment history of ALK+ ALCL patients who relapsed on ALK-targeted therapy (patients 1 and 2) or chemotherapy (patients 3 and 4). (B) Unsupervised clustering of RNA-seq data from chemotherapy-relapsed (patients 3 and 4) and ALK TKI–resistant (patients 1 and 2) patients. (C) Principal component (PC) analysis of gene-expression levels across the 4 resistant ALCL patient samples. (D) Candidate genes identified by the CRISPR screens were analyzed for differential expression between ALK TKI–resistant patients with wild-type or mutated ALK. ALCL99*, patient was treated according to ALCL99 recommendations for patients with central nervous system involvement, as specified in Williams et al.78 CPM, counts per million.

Validation of candidate genes modulating ALK TKI sensitivity in ALCL patients. (A) Schema of the treatment history of ALK+ ALCL patients who relapsed on ALK-targeted therapy (patients 1 and 2) or chemotherapy (patients 3 and 4). (B) Unsupervised clustering of RNA-seq data from chemotherapy-relapsed (patients 3 and 4) and ALK TKI–resistant (patients 1 and 2) patients. (C) Principal component (PC) analysis of gene-expression levels across the 4 resistant ALCL patient samples. (D) Candidate genes identified by the CRISPR screens were analyzed for differential expression between ALK TKI–resistant patients with wild-type or mutated ALK. ALCL99*, patient was treated according to ALCL99 recommendations for patients with central nervous system involvement, as specified in Williams et al.78  CPM, counts per million.

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