Figure 5.
Loss of HECT domain results in a reduction in B-cell development proteins and an enrichment in proteins regulating mRNA splicing. (A) Schematic of sample preparation of spleens for TMT MS analysis (N = 3). (B) Quantification of identified peptides and proteins. (C) PCA using components 1 and 2 showing clustering of WT and ΔHECT samples for significantly upregulated proteins. (D) Pie chart of localizations for all 2797 proteins identified by mass spectometry. (E) Volcano plot of the log2 fold change ΔHECT/WT showing proteins significantly (P < .05) up- (≥1.3) and downregulated (≤0.7). (F) Heatmap of the significantly up- and downregulated proteins showing the top 10 upregulated and top 10 downregulated proteins. (G) Gene ontology analysis showing pathways known to be associated with significantly up- and downregulated proteins using DAVID 6.8 software. For upregulated proteins, includes pathways with ≥10 proteins associated and a P value ≤ .01. Downregulated proteins pathways with P value ≤ .05.

Loss of HECT domain results in a reduction in B-cell development proteins and an enrichment in proteins regulating mRNA splicing. (A) Schematic of sample preparation of spleens for TMT MS analysis (N = 3). (B) Quantification of identified peptides and proteins. (C) PCA using components 1 and 2 showing clustering of WT and ΔHECT samples for significantly upregulated proteins. (D) Pie chart of localizations for all 2797 proteins identified by mass spectometry. (E) Volcano plot of the log2 fold change ΔHECT/WT showing proteins significantly (P < .05) up- (≥1.3) and downregulated (≤0.7). (F) Heatmap of the significantly up- and downregulated proteins showing the top 10 upregulated and top 10 downregulated proteins. (G) Gene ontology analysis showing pathways known to be associated with significantly up- and downregulated proteins using DAVID 6.8 software. For upregulated proteins, includes pathways with ≥10 proteins associated and a P value ≤ .01. Downregulated proteins pathways with P value ≤ .05.

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