Figure 7.
Figure 7. HBsAg+ DLBCLs displays a distinctive gene expression pattern. (A) HBsAg+ DLBCLs showed a distinctive gene expression profiling. The normalized expression levels were analyzed using the Qlucore Omics Explorer software. Significantly and differentially expressed genes (P < .05) between HBsAg+ (n = 24) and HBsAg− (n = 84) DLBCLs were used to draw the heatmap. (B) GSEA revealed pathway alterations in HBsAg+ DLBCLs compared with that in HBsAg− DLBCLs. The GSEA was performed with 1000 sample permutations. Enrichments were considered significant at false discovery rate q < 0.25. (C) GSEAPreranked tool was used to analyze BCL6 core transcriptional signatures (120 genes,47 BCL6 targeted genes derived from DLBCL,48 ZFP36L1-bound genes,44 and FOXO1-targeted genes49 along the preranked genes differentially expressed in HBsAg+ vs HBsAg− DLBCLs. Genes were preranked based on the correlation between the gene expression by comparing HBsAg+ and HBsAg− DLBCLs. The enrichment was tested with 1000 gene set permutations. Enrichments were considered significant at false discovery rate q < 0.05. ES, enrichment score; NES, normalized enrichment score.

HBsAg+DLBCLs displays a distinctive gene expression pattern. (A) HBsAg+ DLBCLs showed a distinctive gene expression profiling. The normalized expression levels were analyzed using the Qlucore Omics Explorer software. Significantly and differentially expressed genes (P < .05) between HBsAg+ (n = 24) and HBsAg (n = 84) DLBCLs were used to draw the heatmap. (B) GSEA revealed pathway alterations in HBsAg+ DLBCLs compared with that in HBsAg DLBCLs. The GSEA was performed with 1000 sample permutations. Enrichments were considered significant at false discovery rate q < 0.25. (C) GSEAPreranked tool was used to analyze BCL6 core transcriptional signatures (120 genes,47  BCL6 targeted genes derived from DLBCL,48  ZFP36L1-bound genes,44  and FOXO1-targeted genes49  along the preranked genes differentially expressed in HBsAg+ vs HBsAg DLBCLs. Genes were preranked based on the correlation between the gene expression by comparing HBsAg+ and HBsAg DLBCLs. The enrichment was tested with 1000 gene set permutations. Enrichments were considered significant at false discovery rate q < 0.05. ES, enrichment score; NES, normalized enrichment score.

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