Figure 6.
Presence of activating RAS mutations renders cells resistant to JMJD1C loss. Fold change in JMJD1C sgRNA abundance (A)56 and ATARIS score (B)55 in leukemia cell lines. Cell lines in blue bear RAS mutations according to the Broad Institute Cancer Cell Line Encyclopedia. (C) MOLM13, MOMO-MAC-1, NOMO1, THP1, U937, and OCI-AML3 cells were infected with the indicated sgRNA-Cas9-TdTomato viruses and subjected to flow cytometry analysis over a period of 28 days. Fold changes in TdTomato positivity compared with day 3 are plotted. Data are mean ± standard deviation of independently transduced triplicate samples. (D) Fold depletion of sgRNAs in MOLM13 cells overexpressing NRASG12V and in mouse MLL-AF9-Cas9 cells overexpressing NRASG12V and KRASG12D. Data are mean ± standard deviation of independently transduced triplicate samples. (E) Western blotting of NRAS/KRAS expression in cells in panel D.