Figure 5.
Figure 5. MSCE116K augments expression of the CD30–IRF4–MYC axis in normal and neoplastic T cells. (A) Expression of the TNFRSF8 gene encoding CD30 is increased in normal T cells transduced with MSCE116K. Data are from RNAseq. Representative results from 2 independent experiments. (B) CD30 protein expression is increased in normal T cells transduced with MSCE116K. (C) Heat map showing downregulation of E2F2 and upregulation of genes involved in the CD30–IRF4–MYC axis in response to MSCE116K in normal CD4+ T cells. Data are from RNAseq. Representative results from 2 independent experiments. (D) Expression levels of TNFRSF8 and MYC are increased in Karpas 299 cells transduced with MSCE116K. These RNAseq data are from the same experiment shown in Figure 4B. Representative results from 2 independent experiments. (E) Overexpression of E2F2 in Karpas 299 cells decreases expression of CD30 and MYC. Data are from flow cytometry. Representative results from 3 independent experiments. (F) IRF4 knockdown in ALCL cell lines decreases MSC expression. (G) IRF4 ChIP-seq demonstrates binding of IRF4 to the MSC locus 2.3 kb downstream and 2.4 kb and 7.2 kb upstream of the transcriptional start site in ALCL cell lines. MSC-AS1 is a noncoding RNA gene that was minimally expressed at the RNA level and showed no significant differential expression after IRF4 knockdown. RPKM, reads per kilobase of transcript per million mapped reads.

MSCE116K augments expression of the CD30–IRF4–MYC axis in normal and neoplastic T cells. (A) Expression of the TNFRSF8 gene encoding CD30 is increased in normal T cells transduced with MSCE116K. Data are from RNAseq. Representative results from 2 independent experiments. (B) CD30 protein expression is increased in normal T cells transduced with MSCE116K. (C) Heat map showing downregulation of E2F2 and upregulation of genes involved in the CD30IRF4–MYC axis in response to MSCE116K in normal CD4+ T cells. Data are from RNAseq. Representative results from 2 independent experiments. (D) Expression levels of TNFRSF8 and MYC are increased in Karpas 299 cells transduced with MSCE116K. These RNAseq data are from the same experiment shown in Figure 4B. Representative results from 2 independent experiments. (E) Overexpression of E2F2 in Karpas 299 cells decreases expression of CD30 and MYC. Data are from flow cytometry. Representative results from 3 independent experiments. (F) IRF4 knockdown in ALCL cell lines decreases MSC expression. (G) IRF4 ChIP-seq demonstrates binding of IRF4 to the MSC locus 2.3 kb downstream and 2.4 kb and 7.2 kb upstream of the transcriptional start site in ALCL cell lines. MSC-AS1 is a noncoding RNA gene that was minimally expressed at the RNA level and showed no significant differential expression after IRF4 knockdown. RPKM, reads per kilobase of transcript per million mapped reads.

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