Figure 5.
AMPK maintains histone acetylation at Brd4 binding sites. (A) Density plots of H3K9ac, H3K27ac, and H4K8ac ChIP-seq signals centered around the transcription start site. (B-C) Meta profiles of the indicated ChIP-seq dataset centered around the peak apex of 10 615 enhancer elements defined by H3K27ac signal (B) and 6522 enhancer elements defined by BRD4 occupancy based on Roe et al46 (C). (D) A waterfall plot depicting the differences in H3K27ac signals at superenhancers between WT and AMPK KO L-GMPs. The numbers in parentheses indicate the rankings of each gene. (E) Motif analysis of H3K9ac ChIP-seq data set showing the transcription factor motifs enriched in WT L-GMPs compared with AMPK KO L-GMPs. (F) ChIP-seq occupancy profiles of H3K9ac, H3K27ac, and H4K8ac of both AMPK-proficient and AMPK-deficient L-GMPs, as well as the BRD4 profile46 at the Myc locus. Myc enhancer elements E1-E5 are shown in pink shades. (G) ChIP-quantitative polymerase chain reaction to detect BRD4 occupancy at 2 Myc enhancers (E2 and E3) with WT and AMPK KO AML (n = 3). All data represent mean ± standard deviation. *P < .05; **P < .01; ***P < .001 by 1-way ANOVA.

AMPK maintains histone acetylation at Brd4 binding sites. (A) Density plots of H3K9ac, H3K27ac, and H4K8ac ChIP-seq signals centered around the transcription start site. (B-C) Meta profiles of the indicated ChIP-seq dataset centered around the peak apex of 10 615 enhancer elements defined by H3K27ac signal (B) and 6522 enhancer elements defined by BRD4 occupancy based on Roe et al46  (C). (D) A waterfall plot depicting the differences in H3K27ac signals at superenhancers between WT and AMPK KO L-GMPs. The numbers in parentheses indicate the rankings of each gene. (E) Motif analysis of H3K9ac ChIP-seq data set showing the transcription factor motifs enriched in WT L-GMPs compared with AMPK KO L-GMPs. (F) ChIP-seq occupancy profiles of H3K9ac, H3K27ac, and H4K8ac of both AMPK-proficient and AMPK-deficient L-GMPs, as well as the BRD4 profile46  at the Myc locus. Myc enhancer elements E1-E5 are shown in pink shades. (G) ChIP-quantitative polymerase chain reaction to detect BRD4 occupancy at 2 Myc enhancers (E2 and E3) with WT and AMPK KO AML (n = 3). All data represent mean ± standard deviation. *P < .05; **P < .01; ***P < .001 by 1-way ANOVA.

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