Figure 4
Figure 4. Comparison of loop structures around FVIII C2 residue, Asp2267. The crystal structures of recombinant C2 domains from FV (Macedo-Ribeiro et al72) and FVIII (Pratt et al8) were superimposed, and residues around the mutated Asp2267 (FVIII) and the topologically equivalent Gln2132 (FV) are shown. The main chains of factors V and VIII are represented as orange and green ribbons, respectively. Only side chains of Gln2132/Asp2267 and surrounding residues are shown with all their nonhydrogen atoms; the side chains of FV are in orange and those of FVIII are color-coded as in Figure 3. Hydrogen bonds accepted from the Asp2267 carboxylate are indicated with dotted lines. Notice the complete equivalence of main-chain traces in the 2 cofactors, indicating that Asp2267 is dispensable for the observed loop conformation. Notice also that a large number of solvent-exposed side chains differ between the 2 cofactors, pointing to their involvement in specific protein-protein interactions. Inspection of the FVa/FVIIIa models suggests that these residues interact with substrates of the FVapi•FXa and FVIIIapi•FIXa complexes, prothrombin and FX, respectively.

Comparison of loop structures around FVIII C2 residue, Asp2267. The crystal structures of recombinant C2 domains from FV (Macedo-Ribeiro et al72 ) and FVIII (Pratt et al) were superimposed, and residues around the mutated Asp2267 (FVIII) and the topologically equivalent Gln2132 (FV) are shown. The main chains of factors V and VIII are represented as orange and green ribbons, respectively. Only side chains of Gln2132/Asp2267 and surrounding residues are shown with all their nonhydrogen atoms; the side chains of FV are in orange and those of FVIII are color-coded as in Figure 3. Hydrogen bonds accepted from the Asp2267 carboxylate are indicated with dotted lines. Notice the complete equivalence of main-chain traces in the 2 cofactors, indicating that Asp2267 is dispensable for the observed loop conformation. Notice also that a large number of solvent-exposed side chains differ between the 2 cofactors, pointing to their involvement in specific protein-protein interactions. Inspection of the FVa/FVIIIa models suggests that these residues interact with substrates of the FVapi•FXa and FVIIIapi•FIXa complexes, prothrombin and FX, respectively.

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