Figure 2
Figure 2. Genotyping PCRs. WBCs or tail DNA PCR was used for routine genotyping. A Cre-positive (experimental) and Cre-negative (control) male (F8 F/y) and female (F8 F/F) are shown for each tissue-specific Cre model. (A) Duplex PCR of WBC DNA using a common forward primer, P1, in combination with 2 alternative reverse primers, P2 and P3. As depicted in Figure 1B-C, a 712-bp product is amplified from the F8F allele and a 462,bp product from the F8KO allele. (B) Singleplex PCR of WBC DNA using primers P1 and P2 amplifies only the 712-bp F8F allele-specific product. (C) Singleplex PCR of WBC DNA using primers P1 and P3 amplifies a 462 bp F8KO allele-specific product but can also amplify a 1683-bp product from the F8F allele. (D) A Cre-recombinase coding sequence–specific PCR of WBC DNA identifies Cre+ mice. No signal is seen for the Vav1-Cre transgene because it contains a codon-optimized iCre sequence, which is not recognized by the native Cre primers we used. (E) Duplex PCR analysis of tail DNA using primers P1, P2, and P3 detects both F8F and F8KO alleles, especially important for Vav1- and Tek-Cre mice, in which WBC DNA undergoes complete F8F→KO gene conversion.

Genotyping PCRs. WBCs or tail DNA PCR was used for routine genotyping. A Cre-positive (experimental) and Cre-negative (control) male (F8 F/y) and female (F8 F/F) are shown for each tissue-specific Cre model. (A) Duplex PCR of WBC DNA using a common forward primer, P1, in combination with 2 alternative reverse primers, P2 and P3. As depicted in Figure 1B-C, a 712-bp product is amplified from the F8F allele and a 462,bp product from the F8KO allele. (B) Singleplex PCR of WBC DNA using primers P1 and P2 amplifies only the 712-bp F8F allele-specific product. (C) Singleplex PCR of WBC DNA using primers P1 and P3 amplifies a 462 bp F8KO allele-specific product but can also amplify a 1683-bp product from the F8F allele. (D) A Cre-recombinase coding sequence–specific PCR of WBC DNA identifies Cre+ mice. No signal is seen for the Vav1-Cre transgene because it contains a codon-optimized iCre sequence, which is not recognized by the native Cre primers we used. (E) Duplex PCR analysis of tail DNA using primers P1, P2, and P3 detects both F8F and F8KO alleles, especially important for Vav1- and Tek-Cre mice, in which WBC DNA undergoes complete F8F→KO gene conversion.

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