Figure 4
Figure 4. USB1 directly catalyzes 3′ terminal 2′, 3′ cyclic phosphate formation. (A) Degradation of oligo(U)7 RNA by Exo T (i) or USB1 (ii, iii). C: oligo(U)7 RNA incubated in buffer for 30 minutes. (B) Expected masses of potential oligo(U)7 RNA degradation products containing 3′OH, 3′p or 3′ > p groups. Blue box: observed masses after incubation with Exo T; red boxes: observed masses after incubation with USB1. (C) MALDI-TOF mass spectrometric analysis of oligo(U)7 RNA degradation products. m/z, mass-charge ratio. ∧ indicates artifacts. USB1 degradation products with 3′ end > p modifications are marked in red.

USB1 directly catalyzes 3′ terminal 2′, 3′ cyclic phosphate formation. (A) Degradation of oligo(U)7 RNA by Exo T (i) or USB1 (ii, iii). C: oligo(U)7 RNA incubated in buffer for 30 minutes. (B) Expected masses of potential oligo(U)7 RNA degradation products containing 3′OH, 3′p or 3′ > p groups. Blue box: observed masses after incubation with Exo T; red boxes: observed masses after incubation with USB1. (C) MALDI-TOF mass spectrometric analysis of oligo(U)7 RNA degradation products. m/z, mass-charge ratio. ∧ indicates artifacts. USB1 degradation products with 3′ end > p modifications are marked in red.

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