Figure 1
s-q-PCR can determine a large gene deletion in DBA. (A) Concept of the DBA s-q-PCR assay. The difference in gene copy number between a healthy sample and that with a large deletion is 2-fold (i). When all genomic s-q-PCR for genes of interest synchronously amplify DNA fragments, a 2-fold difference in the gene copy number is detected by a 1-cycle difference of the Ct scores of the s-q-PCR amplification curves (ii). Also shown is a dot plot of the Ct scores (iii). (B) Results of the amplification curves of s-q-PCR performed with a healthy person (i) and a DBA patient (patient 3; ii). The top panel shows the results of PCR cycles; the bottom panel is an extended graph of the PCR cycles at logarithmic amplification. (C) Graph showing Ct scores of s-q-PCR. If all specific primer sets for DBA genes show a 1-cycle delay relative to each other, this indicates a large deletion in the gene. Gene primer sets with a large deletion are underlined in the graph. **P < .001.

s-q-PCR can determine a large gene deletion in DBA. (A) Concept of the DBA s-q-PCR assay. The difference in gene copy number between a healthy sample and that with a large deletion is 2-fold (i). When all genomic s-q-PCR for genes of interest synchronously amplify DNA fragments, a 2-fold difference in the gene copy number is detected by a 1-cycle difference of the Ct scores of the s-q-PCR amplification curves (ii). Also shown is a dot plot of the Ct scores (iii). (B) Results of the amplification curves of s-q-PCR performed with a healthy person (i) and a DBA patient (patient 3; ii). The top panel shows the results of PCR cycles; the bottom panel is an extended graph of the PCR cycles at logarithmic amplification. (C) Graph showing Ct scores of s-q-PCR. If all specific primer sets for DBA genes show a 1-cycle delay relative to each other, this indicates a large deletion in the gene. Gene primer sets with a large deletion are underlined in the graph. **P < .001.

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