Figure 1
Figure 1. A segment spanning residues 684-702 of the PECAM-1 cytoplasmic domain interacts with DPC micelles. (A) The HSQC spectrum of 15N–labeled PECAM594-711, generated as described in supplemental Figure 1, reveals its intrinsically unstructured nature. (B) HSQC spectra of 15N–labeled PECAM594-711 at DPC concentrations ranging from 0-600mM. Arrows highlight residues that shift and are presumed to participate in DPC binding. (C) PECAM659-711 HSQC signals in the absence (black) and presence (red) of DPC micelles exhibiting 1H/15N chemical shift differences greater than 0.2 ppm are labeled with their single-letter amino acid code and position within full-length human PECAM-1. (D) Plot of the combined 1H/15N chemical shift difference for residues of PECAM659-711 in the absence versus presence of 600mM DPC. Gray bars indicate residues for which backbone resonances were detected in one but not the other sample (and thus, no shift difference could be calculated). Proline 694 is marked with “P,” and residues where it was not possible to make assignments because of missing or overlapping cross peaks are indicated with asterisks. (E) Heteronuclear 1H-15N NOE values in the absence (gray) and presence (black) of DPC indicate that residues perturbed by micelles also become more ordered. Residues for which the hetNOE value could not be determined have a value of 0. (F) Three-residue averaged secondary shifts, where (ΔCα − ΔCβ)i = 1/3(ΔCi − 1α + ΔCαi + ΔCi + 1α − ΔCi − 1β − ΔCβi − ΔCi + 1β), versus residue sequence numbers i.18 Each ΔCα and ΔCβ in the equation is the deviation between the experimentally observed and random coil chemical shift value of 13Cα and 13Cβ, respectively.19,20 Characteristic positive (ΔCα − ΔCβ) values predict a helix spanning T682-Y701.

A segment spanning residues 684-702 of the PECAM-1 cytoplasmic domain interacts with DPC micelles. (A) The HSQC spectrum of 15N–labeled PECAM594-711, generated as described in supplemental Figure 1, reveals its intrinsically unstructured nature. (B) HSQC spectra of 15N–labeled PECAM594-711 at DPC concentrations ranging from 0-600mM. Arrows highlight residues that shift and are presumed to participate in DPC binding. (C) PECAM659-711 HSQC signals in the absence (black) and presence (red) of DPC micelles exhibiting 1H/15N chemical shift differences greater than 0.2 ppm are labeled with their single-letter amino acid code and position within full-length human PECAM-1. (D) Plot of the combined 1H/15N chemical shift difference for residues of PECAM659-711 in the absence versus presence of 600mM DPC. Gray bars indicate residues for which backbone resonances were detected in one but not the other sample (and thus, no shift difference could be calculated). Proline 694 is marked with “P,” and residues where it was not possible to make assignments because of missing or overlapping cross peaks are indicated with asterisks. (E) Heteronuclear 1H-15N NOE values in the absence (gray) and presence (black) of DPC indicate that residues perturbed by micelles also become more ordered. Residues for which the hetNOE value could not be determined have a value of 0. (F) Three-residue averaged secondary shifts, where (ΔCα − ΔCβ)i = 1/3(ΔCi − 1α + ΔCαi + ΔCi + 1α − ΔCi − 1β − ΔCβi − ΔCi + 1β), versus residue sequence numbers i.18  Each ΔCα and ΔCβ in the equation is the deviation between the experimentally observed and random coil chemical shift value of 13Cα and 13Cβ, respectively.19,20  Characteristic positive (ΔCα − ΔCβ) values predict a helix spanning T682-Y701.

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