Figure 3.
Figure 3. Manhattan plot illustrating results of a GWAS with MTX clearance as the phenotype. The y-axis plots the inverse of the log of the association P value for each typed SNP (> 500 000 SNPs interrogated per patient) as it relates to MTX clearance; the x-axis sorts SNPs based on chromosomal position. The peak of P values corresponds to SNPs that localize to SLCO1B1, indicating that variation in this gene identified genetic variation associated with interpatient variability in MTX clearance among 1279 children with ALL.18

Manhattan plot illustrating results of a GWAS with MTX clearance as the phenotype. The y-axis plots the inverse of the log of the association P value for each typed SNP (> 500 000 SNPs interrogated per patient) as it relates to MTX clearance; the x-axis sorts SNPs based on chromosomal position. The peak of P values corresponds to SNPs that localize to SLCO1B1, indicating that variation in this gene identified genetic variation associated with interpatient variability in MTX clearance among 1279 children with ALL.18 

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