Figure 2.
Driver events and mutational locations. (A) Frequency of driver mutations and translocations (y-axis) are shown for RVD-alone (left) and RVD + HDM (right) arms. Each column shows 1 patient; blue and red triangles show mutations detected at diagnosis and relapse, respectively. (B) Change in total mutational load from diagnosis to relapse (y-axis). Red triangles (patients treated with RVD + HDM) and blue points (patients treated with RVD alone) show the total mutational load difference between diagnosis and relapse for each patient. Polynomial regression curves are shown for the 2 arms over time (x-axis). (C) Change in genomic region use (y-axis) for mutations overlapping with RNAs for RVD-alone and RVD + HDM arms (left to right). (D) Transcription strand bias analysis. Relative contribution (y-axis, top) for 6 possible SNV types (color coded) for relapse-only mutations are shown. Contributions from mutations overlapping with transcribed strand are shown in darker colors, and transcribed strand shown in lighter colors. log2 ratio of transcribed/untranscribed strands are shown (bottom) with statistically significant differences marked with an asterisk (∗). (E) De novo motifs identified 12 bp upstream and downstream of SNVs. Consensus motifs (left) and significance values (right) are shown.

Driver events and mutational locations. (A) Frequency of driver mutations and translocations (y-axis) are shown for RVD-alone (left) and RVD + HDM (right) arms. Each column shows 1 patient; blue and red triangles show mutations detected at diagnosis and relapse, respectively. (B) Change in total mutational load from diagnosis to relapse (y-axis). Red triangles (patients treated with RVD + HDM) and blue points (patients treated with RVD alone) show the total mutational load difference between diagnosis and relapse for each patient. Polynomial regression curves are shown for the 2 arms over time (x-axis). (C) Change in genomic region use (y-axis) for mutations overlapping with RNAs for RVD-alone and RVD + HDM arms (left to right). (D) Transcription strand bias analysis. Relative contribution (y-axis, top) for 6 possible SNV types (color coded) for relapse-only mutations are shown. Contributions from mutations overlapping with transcribed strand are shown in darker colors, and transcribed strand shown in lighter colors. log2 ratio of transcribed/untranscribed strands are shown (bottom) with statistically significant differences marked with an asterisk (∗). (E) De novo motifs identified 12 bp upstream and downstream of SNVs. Consensus motifs (left) and significance values (right) are shown.

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