Figure 2.
NFIX loss perturbs abundance of multiple hematopoietic progenitor cell clusters. (A)(i) UMAP plot comparing Nfix+/+ and NfixΔ/Δ cell clusters; (ii) Visualization of 2D KDE, with the resulting contour lines superimposed on UMAP plot shown in (i). ∗P value <.05; and (iii) Three-dimensional visualization of the KDE, with the resulting density map superimposed on top of the UMAP plot shown in panels i-ii. Arrowheads indicate significant differences between LT-HSC, MKP, GMP, and MEP clusters. Arrowhead colors correspond to clusters indicated in panels i-ii. (B) Bar plot of the percentage of cells assigned to each cell type. ∗P value <.05. (C) Representative GSEA results for LT-HSC.1 (top) and LT-HSC.2 (bottom). (D) Schematic of shifts in abundance of HSPC subsets following the loss of Nfix. GSEA, gene set enrichment analysis.

NFIX loss perturbs abundance of multiple hematopoietic progenitor cell clusters. (A)(i) UMAP plot comparing Nfix+/+ and NfixΔ/Δ cell clusters; (ii) Visualization of 2D KDE, with the resulting contour lines superimposed on UMAP plot shown in (i). ∗P value <.05; and (iii) Three-dimensional visualization of the KDE, with the resulting density map superimposed on top of the UMAP plot shown in panels i-ii. Arrowheads indicate significant differences between LT-HSC, MKP, GMP, and MEP clusters. Arrowhead colors correspond to clusters indicated in panels i-ii. (B) Bar plot of the percentage of cells assigned to each cell type. ∗P value <.05. (C) Representative GSEA results for LT-HSC.1 (top) and LT-HSC.2 (bottom). (D) Schematic of shifts in abundance of HSPC subsets following the loss of Nfix. GSEA, gene set enrichment analysis.

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