Figure 3.
MD for the prediction of IL-3 mutants with low binding affinity to CD123. (A-B), WT and Mut4 interface interaction between IL-3 and IL-3Ra. HB is represented in yellow; salt bridge is represented in magenta; distance in Å for each interaction are also reported in magenta color. (C) ΔGbinding energies vs simulation time in WT and Mut4 systems. (D) Scatter plot of ΔGbinding energies of all analyzed frames in WT and Mut4 systems. (E) Time-course analysis of apoptosis measured by caspase-3 activation on target TIME cells cocultured for 8 hours with NT, IL-3z WT CAR-, and IL-3z mutant CAR–engineered CIK cells (E:T ratio of 5:1) using Operetta CLS. Custom-made MatLab-based software provided the image analyses for extraction of the populated area of the different dyes; n = 3 wells. (F) Live-cell imaging of the dynamic processes over time and space. First row represents the frame took at time 0, whereas the second row reports the frame taken after 8 hours.

MD for the prediction of IL-3 mutants with low binding affinity to CD123. (A-B), WT and Mut4 interface interaction between IL-3 and IL-3Ra. HB is represented in yellow; salt bridge is represented in magenta; distance in Å for each interaction are also reported in magenta color. (C) ΔGbinding energies vs simulation time in WT and Mut4 systems. (D) Scatter plot of ΔGbinding energies of all analyzed frames in WT and Mut4 systems. (E) Time-course analysis of apoptosis measured by caspase-3 activation on target TIME cells cocultured for 8 hours with NT, IL-3z WT CAR-, and IL-3z mutant CAR–engineered CIK cells (E:T ratio of 5:1) using Operetta CLS. Custom-made MatLab-based software provided the image analyses for extraction of the populated area of the different dyes; n = 3 wells. (F) Live-cell imaging of the dynamic processes over time and space. First row represents the frame took at time 0, whereas the second row reports the frame taken after 8 hours.

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