Figure 5.
NFAT1-deficient patient CD4+T cells are exhausted. (A) Volcano plot showing DE in CD4+ memory T cells between patient and 5 healthy controls. (B) Violin plots of significantly differentially expressed genes of interest in CD4+ memory T cells in patient and healthy controls. (C) Frequency of CD4+ T cell subsets in the patient and a representative control, including CD45RA+CD27− TEMRA, CD45RA+CD27+ naïve (marked as “N”), CD45RA−CD27− effector memory (EM), and CD45RA−CD27+ central memory (CM). Quadrants corresponding to each subset are shown at top right. (D) Quantification of C. (E) Expression of NFAT1 in patient and control naïve and memory CD4+ T cells. Mean fluorescence intensities are indicated. (F) Frequency of TH1 (IFN-γ+IL-17A−), TH17 (IL-17A+IFN-γ+) cells in memory CD4+ T cells of the patient and a representative control. (G-H) Quantification of F. (I) Frequency of TH2 (IL-4+IL-21−) and IL21+ (IL-21+IL-4−) cells in memory CD4+ T cells of the patient and a representative control. (J-K) Quantification of I. (L) Frequency of TNF-α+ and IL-2+ CD4+ memory T cells in the patient and a representative control. (M-N) Quantification of L. ∗P < .05, ∗∗P < .01, ∗∗∗P < .001, ∗∗∗∗P < .0001, one-way analysis of variance and Tukey’s post-hoc test. NS, not significant. Green circles, healthy control; blue circle, II-2; blue upright triangle, I-2; blue inverted triangle, I-1; blue square, II-3; red diamond, II-1.

NFAT1-deficient patient CD4+T cells are exhausted. (A) Volcano plot showing DE in CD4+ memory T cells between patient and 5 healthy controls. (B) Violin plots of significantly differentially expressed genes of interest in CD4+ memory T cells in patient and healthy controls. (C) Frequency of CD4+ T cell subsets in the patient and a representative control, including CD45RA+CD27 TEMRA, CD45RA+CD27+ naïve (marked as “N”), CD45RACD27 effector memory (EM), and CD45RACD27+ central memory (CM). Quadrants corresponding to each subset are shown at top right. (D) Quantification of C. (E) Expression of NFAT1 in patient and control naïve and memory CD4+ T cells. Mean fluorescence intensities are indicated. (F) Frequency of TH1 (IFN-γ+IL-17A), TH17 (IL-17A+IFN-γ+) cells in memory CD4+ T cells of the patient and a representative control. (G-H) Quantification of F. (I) Frequency of TH2 (IL-4+IL-21) and IL21+ (IL-21+IL-4) cells in memory CD4+ T cells of the patient and a representative control. (J-K) Quantification of I. (L) Frequency of TNF-α+ and IL-2+ CD4+ memory T cells in the patient and a representative control. (M-N) Quantification of L. ∗P < .05, ∗∗P < .01, ∗∗∗P < .001, ∗∗∗∗P < .0001, one-way analysis of variance and Tukey’s post-hoc test. NS, not significant. Green circles, healthy control; blue circle, II-2; blue upright triangle, I-2; blue inverted triangle, I-1; blue square, II-3; red diamond, II-1.

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