Figure 3.
p53 expression patterns by immunohistochemistry as a readout for TP53 alterations. (A) p53 immunohistochemistry showing high-level (24%) mutant protein accumulation in a trephine bone marrow biopsy with AML (×20). (B) Violin plot showing median and quartiles, with smoothed width reflecting frequency distribution of p53 accumulation levels in bone marrow samples with TP53 mutant and wild-type AML. p53 accumulation is measured using digital image analysis-assisted immunohistochemistry; percentage values represent cells with strong (3+) staining intensity. Cases with mutant p53 truncating pattern are excluded. Dashed line intersecting x-axis depicts 7.2% cutoff. (C) p53 immunohistochemistry showing loss of signal (truncated) mutant pattern. Signal in background stromal elements presents internal control (×20). (D) ROC curve demonstrating an AUC of 0.965 (95% CI: 0.939-0.991), indicating a robust predictive ability for p53 immunohistochemistry to distinguish between AML with mutant and wild-type TP53. (E) Estimates of mutant p53 clone size by dominant VAF and protein expression among p53high and (F) p53truncated. (G) Combined aCGH and SNP analysis of the TP53 gene in AML case with intact TP53 CN; right panel shows corresponding p53high expression by immunohistochemistry [A, C, G: 20× magnification, hematoxylin counterstain].

p53 expression patterns by immunohistochemistry as a readout for TP53 alterations. (A) p53 immunohistochemistry showing high-level (24%) mutant protein accumulation in a trephine bone marrow biopsy with AML (×20). (B) Violin plot showing median and quartiles, with smoothed width reflecting frequency distribution of p53 accumulation levels in bone marrow samples with TP53 mutant and wild-type AML. p53 accumulation is measured using digital image analysis-assisted immunohistochemistry; percentage values represent cells with strong (3+) staining intensity. Cases with mutant p53 truncating pattern are excluded. Dashed line intersecting x-axis depicts 7.2% cutoff. (C) p53 immunohistochemistry showing loss of signal (truncated) mutant pattern. Signal in background stromal elements presents internal control (×20). (D) ROC curve demonstrating an AUC of 0.965 (95% CI: 0.939-0.991), indicating a robust predictive ability for p53 immunohistochemistry to distinguish between AML with mutant and wild-type TP53. (E) Estimates of mutant p53 clone size by dominant VAF and protein expression among p53high and (F) p53truncated. (G) Combined aCGH and SNP analysis of the TP53 gene in AML case with intact TP53 CN; right panel shows corresponding p53high expression by immunohistochemistry [A, C, G: 20× magnification, hematoxylin counterstain].

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