Figure 2.
Immunophenotype of malignant CAR T cells. (A) UMAP plots comparing phenotype of the donor-derived CAR T-cell product and malignant CAR T cells: (left) combined plot showing CD3+CD4−CD8+ (cluster 1, red dots), CD3+CD4+CD8− (cluster 2, green dots), and CD3−CD4+CD8− (cluster 3, blue dots) cells; (middle) plot showing differences in CD4, CD8, and CD3 expression between malignant CAR T cells (aquamarine dots falling in cluster 2 and cluster 3) and the donor-derived product (red dots falling in cluster 1 and 2); and (right) expression of the CAR19 transcript of CD3+ and CD3− cells (dot plot). (B) Expression of lineage markers on malignant cells including B cells, macrophages, monocytes, dendritic cells (DC), NK cells, and γ-δ T cells. (C) T-cell memory, (D) T-helper subtype, and (E) activation and inhibitory molecule expression of malignant T cells. CLR, centered log ratio.

Immunophenotype of malignant CAR T cells. (A) UMAP plots comparing phenotype of the donor-derived CAR T-cell product and malignant CAR T cells: (left) combined plot showing CD3+CD4CD8+ (cluster 1, red dots), CD3+CD4+CD8 (cluster 2, green dots), and CD3CD4+CD8 (cluster 3, blue dots) cells; (middle) plot showing differences in CD4, CD8, and CD3 expression between malignant CAR T cells (aquamarine dots falling in cluster 2 and cluster 3) and the donor-derived product (red dots falling in cluster 1 and 2); and (right) expression of the CAR19 transcript of CD3+ and CD3 cells (dot plot). (B) Expression of lineage markers on malignant cells including B cells, macrophages, monocytes, dendritic cells (DC), NK cells, and γ-δ T cells. (C) T-cell memory, (D) T-helper subtype, and (E) activation and inhibitory molecule expression of malignant T cells. CLR, centered log ratio.

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