Figure 3.
eQTLs regional association plots. Plots show SNPs associated with expression of DEXI (A) and JMY (B). The top track indicates negative log10P values for associations between SNPs and expression of DEXI (A) or JMY (B). SNPs (represented by triangles) are colored according to linkage disequilibrium (LD), with the sentinel SNP (blue triangle) that showed the most significant association with expression. The middle track (green horizontal lines) shows the location and transcriptional direction of all coding genes in the displayed regions. The bottom track (blue lines) indicates genetic regions containing known regulatory elements annotated using the Ensembl database (microRNA target sites, promoters, enhancers, and ENCODE feature clusters that can be associated with transcription factor binding motifs). Plots were made using SNiPA, a SNPs annotator.

eQTLs regional association plots. Plots show SNPs associated with expression of DEXI (A) and JMY (B). The top track indicates negative log10P values for associations between SNPs and expression of DEXI (A) or JMY (B). SNPs (represented by triangles) are colored according to linkage disequilibrium (LD), with the sentinel SNP (blue triangle) that showed the most significant association with expression. The middle track (green horizontal lines) shows the location and transcriptional direction of all coding genes in the displayed regions. The bottom track (blue lines) indicates genetic regions containing known regulatory elements annotated using the Ensembl database (microRNA target sites, promoters, enhancers, and ENCODE feature clusters that can be associated with transcription factor binding motifs). Plots were made using SNiPA, a SNPs annotator.

Close Modal

or Create an Account

Close Modal
Close Modal