Figure 4.
Prekallikrein and factor XI apple 4 domains. (A) Apple domain schematic. A typical apple (PAN) domain contains ∼90 amino acids (indicated by circles) and is constrained by 3 disulfide bonds (black circles and connecting bars). The region of the domain within the gray box is presented in detail in panels B and C. (B) PK-A4 residues 298 to 329. Amino acids from the PK-A4 domain highlighted by the gray box in panel A are shown for the coelacanth, West African lungfish, and human PK. Residues 321 and 326 are highlighted. In lungfish and human PK, these residues are cysteines that form a disulfide bond. In the coelacanth, they are histidine and phenylalanine. (C) FXI-A4 residues 298 to 329. Amino acids from the FXI-A4 domain highlighted by the gray box in panel A are shown for platypus, opossum, and human FXI. Residues 321 and 326 are highlighted. Residue 326 is glycine in all 3 species. In opossum and human FXI, residue 321 is a cysteine that forms the interchain disulfide bond connecting the subunits of the FXI dimer. (D) Topology diagrams of the human FXI dimer interface. Shown are 2 FXI-A4 domains (1 subunit is shown in yellow; the other in white) forming the FXI dimer interface. The Cys321-Cys321 interchain disulfide bond is shown at the top in orange. Hydrophobic residues Leu284, Ile290, and Tyr329 are shown in black, and salt bridges are formed between Lys331 (blue) and Glu287 (red) and Arg345 (blue) and Asp289 (red). The bottom image is rotated 90° relative to the top image. After Papagrigoriou et al.53 (E) Predicted FXI dimer interface for platypus FXI. Interactions are the same as those in panel D. The Cys321-Cys321 is not present in platypus FXI; instead, there is an additional salt bridge between Arg325 (blue) and Asp321 (red). The bottom image is rotated 90° relative to the top image.

Prekallikrein and factor XI apple 4 domains. (A) Apple domain schematic. A typical apple (PAN) domain contains ∼90 amino acids (indicated by circles) and is constrained by 3 disulfide bonds (black circles and connecting bars). The region of the domain within the gray box is presented in detail in panels B and C. (B) PK-A4 residues 298 to 329. Amino acids from the PK-A4 domain highlighted by the gray box in panel A are shown for the coelacanth, West African lungfish, and human PK. Residues 321 and 326 are highlighted. In lungfish and human PK, these residues are cysteines that form a disulfide bond. In the coelacanth, they are histidine and phenylalanine. (C) FXI-A4 residues 298 to 329. Amino acids from the FXI-A4 domain highlighted by the gray box in panel A are shown for platypus, opossum, and human FXI. Residues 321 and 326 are highlighted. Residue 326 is glycine in all 3 species. In opossum and human FXI, residue 321 is a cysteine that forms the interchain disulfide bond connecting the subunits of the FXI dimer. (D) Topology diagrams of the human FXI dimer interface. Shown are 2 FXI-A4 domains (1 subunit is shown in yellow; the other in white) forming the FXI dimer interface. The Cys321-Cys321 interchain disulfide bond is shown at the top in orange. Hydrophobic residues Leu284, Ile290, and Tyr329 are shown in black, and salt bridges are formed between Lys331 (blue) and Glu287 (red) and Arg345 (blue) and Asp289 (red). The bottom image is rotated 90° relative to the top image. After Papagrigoriou et al.53  (E) Predicted FXI dimer interface for platypus FXI. Interactions are the same as those in panel D. The Cys321-Cys321 is not present in platypus FXI; instead, there is an additional salt bridge between Arg325 (blue) and Asp321 (red). The bottom image is rotated 90° relative to the top image.

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