Figure 2.
Lung ILC2s isolated from naïve WT mice also display high levels of TCR constant region transcripts. (A) Naïve lung ILC2s from adult WT mice were isolated based on CD45+Lin–Thy1.2+CD127+CD25+γδTCR– surface markers with 2 rounds of cell sorting (red gate). Lung tissues were pooled from 8 to 9 sex- and age-matched mice for optimal yield. (B) Fluorescence-activated cell sorting (FACS) plots showing enriched lung ILC2 population before downstream PCR analysis. The purified population was tested for potential γδT cell contamination. (C) RT-PCR was performed on both WT and Rag1−/− ILC2s to verify the expression of TCR constant region genes seen in cecal ILC2s. WT CD3+ splenocytes (Spl–CD3ε+ WT) were used as a positive control and fibroblasts cultured from fibro/adipogenic progenitors were used as a negative control for sterile TCR mRNA expression. Glyceraldehyde-3-phosphate dehydrogenase (Gapdh) primers were used as a loading control. (D) scRNA-seq analysis of independently sorted lung CD45+Lin–RORa+/− cells. ILC2 cluster was identified based on ILC2-specific gene expression (Areg, Il7r, Rora, Gata3) and a relative expression heatmap of TCR constant genes was created to complement the RT-PCR data. FSC, forward scatter; SSC, side scatter.

Lung ILC2s isolated from naïve WT mice also display high levels of TCR constant region transcripts. (A) Naïve lung ILC2s from adult WT mice were isolated based on CD45+LinThy1.2+CD127+CD25+γδTCR surface markers with 2 rounds of cell sorting (red gate). Lung tissues were pooled from 8 to 9 sex- and age-matched mice for optimal yield. (B) Fluorescence-activated cell sorting (FACS) plots showing enriched lung ILC2 population before downstream PCR analysis. The purified population was tested for potential γδT cell contamination. (C) RT-PCR was performed on both WT and Rag1−/− ILC2s to verify the expression of TCR constant region genes seen in cecal ILC2s. WT CD3+ splenocytes (SplCD3ε+ WT) were used as a positive control and fibroblasts cultured from fibro/adipogenic progenitors were used as a negative control for sterile TCR mRNA expression. Glyceraldehyde-3-phosphate dehydrogenase (Gapdh) primers were used as a loading control. (D) scRNA-seq analysis of independently sorted lung CD45+LinRORa+/− cells. ILC2 cluster was identified based on ILC2-specific gene expression (Areg, Il7r, Rora, Gata3) and a relative expression heatmap of TCR constant genes was created to complement the RT-PCR data. FSC, forward scatter; SSC, side scatter.

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