Protein encoding changes identified additionally by RHtyper analysis of WGS in a validation cohort of 57 patients with SCD
Additional changes identified by RHtyper . | RHD . | RHCE . | ||||||
---|---|---|---|---|---|---|---|---|
Nucleotide . | Amino acid . | Discordant, n . | Confirmed, n* . | Nucleotide . | Amino acid . | Discordant, n. . | Confirmed, n* . | |
Tested by targeted RH SNP genotyping† | ||||||||
Zygosity | Hemizygous deletion | — | 2 | 2 | — | — | — | — |
Missense | — | — | — | — | 48 G>C | Trp16Cys | 1 | 0 |
Not tested by targeted RH SNP genotyping | ||||||||
Missense | 473 G>A (novel) | Ser158Asn | 1 | 1 | 941 T>C | Val314Ala | 2 | 2 |
520 G>C | Val174Met | 1 | 1 |
Additional changes identified by RHtyper . | RHD . | RHCE . | ||||||
---|---|---|---|---|---|---|---|---|
Nucleotide . | Amino acid . | Discordant, n . | Confirmed, n* . | Nucleotide . | Amino acid . | Discordant, n. . | Confirmed, n* . | |
Tested by targeted RH SNP genotyping† | ||||||||
Zygosity | Hemizygous deletion | — | 2 | 2 | — | — | — | — |
Missense | — | — | — | — | 48 G>C | Trp16Cys | 1 | 0 |
Not tested by targeted RH SNP genotyping | ||||||||
Missense | 473 G>A (novel) | Ser158Asn | 1 | 1 | 941 T>C | Val314Ala | 2 | 2 |
520 G>C | Val174Met | 1 | 1 |