Table 1.

Protein encoding changes identified additionally by RHtyper analysis of WGS in a validation cohort of 57 patients with SCD

Additional changes identified by RHtyperRHDRHCE
NucleotideAmino acidDiscordant, nConfirmed, n*NucleotideAmino acidDiscordant, n.Confirmed, n*
Tested by targeted RH SNP genotyping       
 Zygosity Hemizygous deletion — — — — — 
 Missense — — — — 48 G>C Trp16Cys 
Not tested by targeted RH SNP genotyping     
 Missense 473 G>A (novel) Ser158Asn 941 T>C Val314Ala 
520 G>C Val174Met 
Additional changes identified by RHtyperRHDRHCE
NucleotideAmino acidDiscordant, nConfirmed, n*NucleotideAmino acidDiscordant, n.Confirmed, n*
Tested by targeted RH SNP genotyping       
 Zygosity Hemizygous deletion — — — — — 
 Missense — — — — 48 G>C Trp16Cys 
Not tested by targeted RH SNP genotyping     
 Missense 473 G>A (novel) Ser158Asn 941 T>C Val314Ala 
520 G>C Val174Met 
*

Confirmation by Sanger sequencing or independent NGS assays.

RHD and RHCE BeadChip and targeted molecular assays.11 

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