Table 3.

HLA-DR molecules encoded by DRB1*08:03 peptide binding assay for the whole ADAMTS13 molecule in silico

ADAMTS13 peptideDomainSequence (core sequence)%rankPredicted binding
101-115 Metalloprotease ERYVLTNLNIGAELL 1.9 Strong binder 
570-584 Spacer YVTFLTVTPNLTSVY 1.1 Strong binder 
914-928 Thrombospondin-1 motif 5 ELRFLCMDSALRVPV 1.7 Strong binder 
1324-1338 CUB2 GCRLFINVAPHARIA 0.3 Strong binder 
1334-1348 CUB2 HARIAIHALATNMG1.6 Strong binder 
ADAMTS13 peptideDomainSequence (core sequence)%rankPredicted binding
101-115 Metalloprotease ERYVLTNLNIGAELL 1.9 Strong binder 
570-584 Spacer YVTFLTVTPNLTSVY 1.1 Strong binder 
914-928 Thrombospondin-1 motif 5 ELRFLCMDSALRVPV 1.7 Strong binder 
1324-1338 CUB2 GCRLFINVAPHARIA 0.3 Strong binder 
1334-1348 CUB2 HARIAIHALATNMG1.6 Strong binder 

The underlined bold sequences indicate core sequence which is composed of 9 amino acids peptides and recognized by 9 pocket motifs of HLA-DR molecules.

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