Table 2.

Multivariate analysis of the effect of polymorphisms in folate-related genes on in vitro MTX sensitivity (TSI50) of childhood ALL



Multivariate analysis
Polymorphism
TSI50,cont, Stand β
TSI50,short, Stand β
MTHFR 677C > T   
CT vs CC   −0.033   −0.043  
TT vs CC   0.044   0.067  
MTHFR 1298A > C   
AC vs AA   0.264*  0.281 
CC vs AA   0.064   0.074  
MTR 2756 A > G   
AG vs AA   −0.100   −0.047  
GG vs AA   −0.005   −0.019  
MTRR 66A > G   
AG vs AA   0.272§  0.399 
GG vs AA   0.204   0.272 
MTHFD1 1958G > A   
GA vs GG   0.012   0.137  
AA vs GG   −0.060   −0.003  
SHMT1 1420 C > T   
CT vs CC   −0.002   0.026  
TT vs CC   0.259  0.096  
TS 2R3R   
3R2R vs 3R3R   −0.088   −0.058  
2R2R vs 3R3R   −0.034   0.012  
RFC 80G > A   
GA vs GG   0.043   −0.003  
AA vs GG
 
0.009
 
0.057
 


Multivariate analysis
Polymorphism
TSI50,cont, Stand β
TSI50,short, Stand β
MTHFR 677C > T   
CT vs CC   −0.033   −0.043  
TT vs CC   0.044   0.067  
MTHFR 1298A > C   
AC vs AA   0.264*  0.281 
CC vs AA   0.064   0.074  
MTR 2756 A > G   
AG vs AA   −0.100   −0.047  
GG vs AA   −0.005   −0.019  
MTRR 66A > G   
AG vs AA   0.272§  0.399 
GG vs AA   0.204   0.272 
MTHFD1 1958G > A   
GA vs GG   0.012   0.137  
AA vs GG   −0.060   −0.003  
SHMT1 1420 C > T   
CT vs CC   −0.002   0.026  
TT vs CC   0.259  0.096  
TS 2R3R   
3R2R vs 3R3R   −0.088   −0.058  
2R2R vs 3R3R   −0.034   0.012  
RFC 80G > A   
GA vs GG   0.043   −0.003  
AA vs GG
 
0.009
 
0.057
 

The standardized regression coefficient of each independent variable is given as standardized β (Stand β) in multivariate analysis. Because independent variables may have different units, the strength of the regression coefficients (β) may not be comparable and therefore the coefficients are standardized to their means (Stand β) for comparison reasons. In univariate regression, the strength of the association between each independent variable and the dependent variable (outcome measure) is looked at without taking into account the other independent variables; in contrast, in multiple linear regression, the strength of each independent variable is adjusted by the other independent variables in the model. No significant interactions were observed in multiple regression analysis for MTHFR 677C>T*MTHFR 1298A>C, MS2756 A>G*MTRR 66A>G, MTHFR 677C>T*MTHFD1 1958G>A, and MTHFR 677C>T*MTHFD1 1958G>A.

*

P = 006.

P < .01.

P < .05.

§

P = 0.08.

P < .001.

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