Table 3.

Expression of selected genes involved in DNA repair and cell-cycle control in hTERT-transduced T cells


Accession no.

Gene description

Symbol

Affymetrix ID

GFP PD32

GFP PD47

hTERT PD44

hTERT PD80
NM_000546  Tumor protein p53 (Li-Fraumeni syndrome)  TP53  201746_at   1784   1501   1752   1709  
U38945   Cyclin-dependent kinase inhibitor 2A  CDKN2A  209644_x_at   630   913   1135   1239  
NM_007295  Breast cancer 1, early onset  BRCA1  204531_s_at   503   415   452   445  
U49844   Ataxia telangiectasia and Rad3 related  ATR  209902_at   421   248   437   373  
NM_004629  Fanconi anemia, complementation group G  FANCG  203564_at   1411   1223   817   901  
AI796269   Nijmegen breakage syndrome 1 (nibrin)  NBS1  202905_x_at   1202   1185   1427   1251  
NM_002853  RAD1 homolog (Schizosaccharomyces pombe) RAD1  204461_x_at   803   731   776   915  
NM_002894  Retinoblastoma-binding protein 8  RBBP8  203344_s_at   2275   2428   1971   3392  
D80000   SMC1 structural maintenance of chromosomes 1-like 1 (yeast)  SMC1L1  201589_at   5093   4578   4021   5308  
NM_001274  CHK1 checkpoint homolog (S pombe) CHEK1  205394_at   1202   1087   810   1231  
NM_001924  Growth arrest and DNA damage-inducible, α  GADD45A  203725_at   5790   4147   6245   3140  
BC006325   G2 and S-phase expressed 1/G2 and S-phase expressed 1  GTSE1  211040_x_at   1989   1788   2203   2035  
AI968626   HUS1 checkpoint homolog (S pombe) HUS1  204883_s_at   851   495   488   613* 
BC004153   Poly(rC)-binding protein 4  PCBP4  209361_s_at   283   356*  645   607* 
U83981   Protein phosphatase 1, regulatory (inhibitor) subunit 15A  PPP1R15A  37028_at   600   790   1183   1285  
AF085736   RAD17 homolog (S pombe) RAD17  211228_s_at   1613   1024   1333   1196  
NM_004584  RAD9 homolog A (S pombe) RAD9A  204828_at   819   777   842   842  
NM_014454  Sestrin 1  SESN1  218346_s_at   1047   1239   1055   742  
U82828   Ataxia telangiectasia mutated  ATM  212672_at   872   938   1017   1019  
NM_002592  Proliferating cell nuclear antigen  PCNA  201202_at   12590   13100   10539   11530  
M19701   Retinoblastoma 1 (including osteosarcoma)  RB1  211540_s_at   770   625   651*  756  
U19599   BCL2-associated X protein  BAX  211833_s_at   2118   2326   2332   1852  
NM_013229  Apoptotic protease-activating factor  APAF1  204859_s_at   783   674   563   743  
NM_000389  Cyclin-dependent kinase inhibitor 1A (p21, Cip1)  CDKN1A  202284_s_at   3126   4148   4935   3732  
NM_002467  v-myc myelocytomatosis viral oncogene homolog (avian)  MYC  202431_s_at   1153   959   1265   682  
NM_000633  B-cell CLL/lymphoma 2  BCL2  203685_at   4220   4929   4231   3746  
AL117381   BCL2-like 1  BCL2L1  212312_at   1015   1507   1498   1067  
NM_005157  v-abl Abelson murine leukemia viral oncogene homolog 1  ABL1  202123_s_at   828   612   786   565  
NM_006265  RAD21 homolog (S pombe) RAD21  200608_s_at   8995   9550   7463   9790  
NM_000249  mutL homolog 1, colon cancer, nonpolyposis type 2 (Escherichia coli)  MLH1  202520_s_at   3214   2736   2182   2810  
NM_014430  Cell death-inducing DFFA-like effector b  CIDEB  221188_s_at   1087   858   1249   541* 
NM_004208  Programmed cell death 8 (apoptosis-inducing factor)  PDCD8  205512_s_at   965   1003   1209   1007  
BF062629
 
Ras-induced senescence 1
 
RIS1
 
213338_at
 
440
 
572
 
1267
 
508
 

Accession no.

Gene description

Symbol

Affymetrix ID

GFP PD32

GFP PD47

hTERT PD44

hTERT PD80
NM_000546  Tumor protein p53 (Li-Fraumeni syndrome)  TP53  201746_at   1784   1501   1752   1709  
U38945   Cyclin-dependent kinase inhibitor 2A  CDKN2A  209644_x_at   630   913   1135   1239  
NM_007295  Breast cancer 1, early onset  BRCA1  204531_s_at   503   415   452   445  
U49844   Ataxia telangiectasia and Rad3 related  ATR  209902_at   421   248   437   373  
NM_004629  Fanconi anemia, complementation group G  FANCG  203564_at   1411   1223   817   901  
AI796269   Nijmegen breakage syndrome 1 (nibrin)  NBS1  202905_x_at   1202   1185   1427   1251  
NM_002853  RAD1 homolog (Schizosaccharomyces pombe) RAD1  204461_x_at   803   731   776   915  
NM_002894  Retinoblastoma-binding protein 8  RBBP8  203344_s_at   2275   2428   1971   3392  
D80000   SMC1 structural maintenance of chromosomes 1-like 1 (yeast)  SMC1L1  201589_at   5093   4578   4021   5308  
NM_001274  CHK1 checkpoint homolog (S pombe) CHEK1  205394_at   1202   1087   810   1231  
NM_001924  Growth arrest and DNA damage-inducible, α  GADD45A  203725_at   5790   4147   6245   3140  
BC006325   G2 and S-phase expressed 1/G2 and S-phase expressed 1  GTSE1  211040_x_at   1989   1788   2203   2035  
AI968626   HUS1 checkpoint homolog (S pombe) HUS1  204883_s_at   851   495   488   613* 
BC004153   Poly(rC)-binding protein 4  PCBP4  209361_s_at   283   356*  645   607* 
U83981   Protein phosphatase 1, regulatory (inhibitor) subunit 15A  PPP1R15A  37028_at   600   790   1183   1285  
AF085736   RAD17 homolog (S pombe) RAD17  211228_s_at   1613   1024   1333   1196  
NM_004584  RAD9 homolog A (S pombe) RAD9A  204828_at   819   777   842   842  
NM_014454  Sestrin 1  SESN1  218346_s_at   1047   1239   1055   742  
U82828   Ataxia telangiectasia mutated  ATM  212672_at   872   938   1017   1019  
NM_002592  Proliferating cell nuclear antigen  PCNA  201202_at   12590   13100   10539   11530  
M19701   Retinoblastoma 1 (including osteosarcoma)  RB1  211540_s_at   770   625   651*  756  
U19599   BCL2-associated X protein  BAX  211833_s_at   2118   2326   2332   1852  
NM_013229  Apoptotic protease-activating factor  APAF1  204859_s_at   783   674   563   743  
NM_000389  Cyclin-dependent kinase inhibitor 1A (p21, Cip1)  CDKN1A  202284_s_at   3126   4148   4935   3732  
NM_002467  v-myc myelocytomatosis viral oncogene homolog (avian)  MYC  202431_s_at   1153   959   1265   682  
NM_000633  B-cell CLL/lymphoma 2  BCL2  203685_at   4220   4929   4231   3746  
AL117381   BCL2-like 1  BCL2L1  212312_at   1015   1507   1498   1067  
NM_005157  v-abl Abelson murine leukemia viral oncogene homolog 1  ABL1  202123_s_at   828   612   786   565  
NM_006265  RAD21 homolog (S pombe) RAD21  200608_s_at   8995   9550   7463   9790  
NM_000249  mutL homolog 1, colon cancer, nonpolyposis type 2 (Escherichia coli)  MLH1  202520_s_at   3214   2736   2182   2810  
NM_014430  Cell death-inducing DFFA-like effector b  CIDEB  221188_s_at   1087   858   1249   541* 
NM_004208  Programmed cell death 8 (apoptosis-inducing factor)  PDCD8  205512_s_at   965   1003   1209   1007  
BF062629
 
Ras-induced senescence 1
 
RIS1
 
213338_at
 
440
 
572
 
1267
 
508
 
*

Call: absent.

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