Genes with lower levels of expression in MLBCL*
Gene class and specific genes . | Fold change† . |
---|---|
B-cell receptor components and signaling cascade | |
IgM‡§ | 5.1 |
B-cell lymphocyte kinase (BLK)‡ | 2.7 |
SH3 domain-binding protein (SAB) (BTK-associated binding protein) | 2.0 |
B-cell linker protein (BLNK)‡ | 1.5 |
PKCβI‡ | 2.0 |
NFATc‡ | 2.0 |
AKT-1 | 1.5 |
CD22‡ | 2.6 |
Transcription factors | |
Spi-B‡ | 1.6 |
Ikaros | 1.5 |
FOXP1 | 2.0 |
Class II MHC components‡§ | |
DO⇠| 1.9 |
DQβ | 2.0 |
DMα | 1.5 |
Germinal center and other B-cell markers | |
CD10 | 3.1 |
SPAP1 (SH2 domain-containing phosphatase anchor protein, IRTA 4) | 2.4 |
Protein tyrosine phosphatase receptor type C (PTPRCAP) | 1.4 |
TNF family members | |
Transmembrane activator and CAML interactor (TAC1) (TNFRSF13B) | 1.5 |
CD27 (TNFRSF7) | 1.7 |
TRAF5‡ | 1.5 |
Cytokines | |
Interleukin-16‡ | 1.4 |
Gene class and specific genes . | Fold change† . |
---|---|
B-cell receptor components and signaling cascade | |
IgM‡§ | 5.1 |
B-cell lymphocyte kinase (BLK)‡ | 2.7 |
SH3 domain-binding protein (SAB) (BTK-associated binding protein) | 2.0 |
B-cell linker protein (BLNK)‡ | 1.5 |
PKCβI‡ | 2.0 |
NFATc‡ | 2.0 |
AKT-1 | 1.5 |
CD22‡ | 2.6 |
Transcription factors | |
Spi-B‡ | 1.6 |
Ikaros | 1.5 |
FOXP1 | 2.0 |
Class II MHC components‡§ | |
DO⇠| 1.9 |
DQβ | 2.0 |
DMα | 1.5 |
Germinal center and other B-cell markers | |
CD10 | 3.1 |
SPAP1 (SH2 domain-containing phosphatase anchor protein, IRTA 4) | 2.4 |
Protein tyrosine phosphatase receptor type C (PTPRCAP) | 1.4 |
TNF family members | |
Transmembrane activator and CAML interactor (TAC1) (TNFRSF13B) | 1.5 |
CD27 (TNFRSF7) | 1.7 |
TRAF5‡ | 1.5 |
Cytokines | |
Interleukin-16‡ | 1.4 |
Gene list derived from the top 400 genes with lower levels of expression in MLBCL. All genes significant at P < .01
Fold change compared with DLBCL
Previously identified as having reduced expression in Hodgkin Reed-Sternberg cells: IgM, CD22, BLK, PKCβI/II, BLNK, NFATc, Spi-B, class II DOβ, TRAF5, and IL-16.17
Previously identified as having reduced expression in MLBCL: Ig2 and MHC class II.41