Differentially expressed genes in small LTC-DCs
Clone frequency . | Description . | Accession number . | E-value . |
|---|---|---|---|
| Known | |||
| 10 | Thymosin β-4 | X16053 | 0.0 |
| 5 | Human glycoprotein hormone α-subunit | J00152 | e-101 |
| 4 | Human pregnancy-specific β-1-glycoprotein 1 | M93705 | 0.0 |
| 3 | Atp6f, lysosomal ATPase H+ transporter | AB060655 | e-153 |
| 2 | Ferritin light chain | J04716 | 0.0 |
| 2 | Human pregnancy—specific β-1-glycoprotein 4 | M94891 | 0.0 |
| 2 | Epithelial protein lost in neoplasm-a (Eplin) | AF307844 | e-162 |
| 2 | Peroxisomal acyl-CoA oxidase | AF006688 | e-158 |
| 2 | Ribosomal protein S12 | X15962 | e-128 |
| 2 | Cytochrome C oxidase subunit 2 | AF378830 | 0.0 |
| 2 | ATP synthase (F1) ϵ subunit | AK012444 | 0.0 |
| 1 | LAMP-1 | M25244 | 0.0 |
| 1 | Cystatin C (Cst3) | M59470 | e-174 |
| 1 | α-tubulin | BC008117 | 0.0 |
| 1 | CTT ϵ subunit | Z31555 | 0.0 |
| 1 | PCTAIRE-3 | X69026 | e-101 |
| 1 | Thioredoxin interacting factor (Vdup1) | AF282826 | 0.0 |
| 1 | Human Hsp90 | D87666 | 0.0 |
| 1 | ATP synthase (F0) subunit c, P2 | NM026468 | 0.0 |
| 1 | RIKEN clone 2700049122, ribosomal protein P2 | AK012402 | e-178 |
| 1 | RIKEN clone 6530419C17, Nsd1 | AK032683 | 0.0 |
| Unknown | |||
| 1 | Hypothetical protein MGC7474 | NM_024473 | e-144 |
| 1 | RIKEN clone 2410015A15 | AK010484 | e-151 |
| 1 | Similar to KRAB zinc finger protein KR18 | BC040201 | 0.0 |
| 1 | Similar to human putative zinc finger protein C5orf7 | XM_203708 | e-143 |
| 6 | EST matches | — | — |
| 2 | No match | — | — |
| Similar to | |||
| 2 | 60S ribosomal protein L5 | BC005790 | e-59 |
| 1 | Fibroblast growth factor-2 interacting factor (FIF or FT1) | Z67963 | 4e-10 |
| 1 | IMP dehydrogenase | M33934 | 9e-48 |
Clone frequency . | Description . | Accession number . | E-value . |
|---|---|---|---|
| Known | |||
| 10 | Thymosin β-4 | X16053 | 0.0 |
| 5 | Human glycoprotein hormone α-subunit | J00152 | e-101 |
| 4 | Human pregnancy-specific β-1-glycoprotein 1 | M93705 | 0.0 |
| 3 | Atp6f, lysosomal ATPase H+ transporter | AB060655 | e-153 |
| 2 | Ferritin light chain | J04716 | 0.0 |
| 2 | Human pregnancy—specific β-1-glycoprotein 4 | M94891 | 0.0 |
| 2 | Epithelial protein lost in neoplasm-a (Eplin) | AF307844 | e-162 |
| 2 | Peroxisomal acyl-CoA oxidase | AF006688 | e-158 |
| 2 | Ribosomal protein S12 | X15962 | e-128 |
| 2 | Cytochrome C oxidase subunit 2 | AF378830 | 0.0 |
| 2 | ATP synthase (F1) ϵ subunit | AK012444 | 0.0 |
| 1 | LAMP-1 | M25244 | 0.0 |
| 1 | Cystatin C (Cst3) | M59470 | e-174 |
| 1 | α-tubulin | BC008117 | 0.0 |
| 1 | CTT ϵ subunit | Z31555 | 0.0 |
| 1 | PCTAIRE-3 | X69026 | e-101 |
| 1 | Thioredoxin interacting factor (Vdup1) | AF282826 | 0.0 |
| 1 | Human Hsp90 | D87666 | 0.0 |
| 1 | ATP synthase (F0) subunit c, P2 | NM026468 | 0.0 |
| 1 | RIKEN clone 2700049122, ribosomal protein P2 | AK012402 | e-178 |
| 1 | RIKEN clone 6530419C17, Nsd1 | AK032683 | 0.0 |
| Unknown | |||
| 1 | Hypothetical protein MGC7474 | NM_024473 | e-144 |
| 1 | RIKEN clone 2410015A15 | AK010484 | e-151 |
| 1 | Similar to KRAB zinc finger protein KR18 | BC040201 | 0.0 |
| 1 | Similar to human putative zinc finger protein C5orf7 | XM_203708 | e-143 |
| 6 | EST matches | — | — |
| 2 | No match | — | — |
| Similar to | |||
| 2 | 60S ribosomal protein L5 | BC005790 | e-59 |
| 1 | Fibroblast growth factor-2 interacting factor (FIF or FT1) | Z67963 | 4e-10 |
| 1 | IMP dehydrogenase | M33934 | 9e-48 |
The number of clones that match a particular gene is not an accurate reflection of gene expression levels within the tester population because of the nature of the subtraction procedure. Species origin of the genes is Mus musculus, unless indicated otherwise. Database identification codes for gene entry were assigned by GenBank, EMBL, DDBJ, or PDB. Expectation value (E-value) represents the number of different alignments with scores equivalent to or better than the alignment in question and that would be expected to occur in the database by chance alone. E-value is generated by BLAST and is a convenient way to create a significance threshold for reporting results. The lower the E-value, the more significant the match. — indicates not available.