Table 4.

List of domains identified in novel genes by means of multiple domain search tools

Clone IDGene Ontology categoryDescriptionSearching tool
2405 Cell cycle regulator Cell division control protein 54 ProDom 
2073 Chaperone Heat shock 70-kd protein. ATP-binding; heat shock; ProDom  
2247 Enzyme Prenyltransferase and squalene oxidase Pfam  
2656 Enzyme E-class p450 group i signature (motif source owl:s22339) Prints  
2100 Enzyme Acetyl esterase ProDom  
2923 Enzyme Cyclase adenylate type ATP ProDom  
2632 Enzyme Sulfite reductase (NADPH) flavoprotein ProDom  
3121 Enzyme NOS-type oxidoreductase ProDom  
3332 Enzyme Nitrate reductase (NAD[P]H) ProDom  
2363 Enzyme Nitrate reductase ProDom 
2941 Enzyme Acyl-coA oxidase Pfam 
2255 Enzyme Dehydrogenase γ-glutamyl ProDom 
1860 Enzyme 3-isopropylmalate dehydrogenase precursor ProDom  
2247 Enzyme Farnesyltransferase β subunit ProDom  
1667 Enzyme DNA-directed DNA polymerase ProDom  
2148 Enzyme Preprotein translocase SECA subunit ProDom  
2821 Enzyme GlutathioneS-transferases Pfam  
3063 Enzyme inhibitor Trypsin inhibitor, serine protease inhibitor, 41 aa ProDom  
2940 Ligand binding Phosphoribulokinase/recF protein Pfam  
2839 Ligand binding Pyridine nucleotide disulfide reductase class-II signature Prints  
2199 Nucleic acid binding Ribosomal protein 40S S28 S33 repeat acetylation ProDom  
1248 Nucleic acid binding U1 small nuclear ribonucleoprotein ProDom  
2097 Nucleic acid binding Chromosome segregation protein SMC2 ProDom 
2097 Nucleic acid binding λ and other repressor helix-turn-helix signature Prints  
2625 Nucleic acid binding Protein ATP-binding ProDom  
2526 Nucleic acid binding Transmembrane protein HWLF3 late glycoprotein ProDom 
2524 Nucleic acid binding Elongation factor Tu mitochondrial precursor protein ProDom  
1998 Nucleic acid binding Ribosomal protein L20 signature Prints 
1497 Nucleic acid binding Protein homeobox DNA-binding ProDom  
3103 Nucleic acid binding Transcriptional regulator YCF30 protein transcription ProDom  
3132 Nucleic acid binding Double-stranded RNA-specific editase 1 ProDom 
2952 Nucleic acid binding Homeobox protein GSH-1 ProDom 
2940 Nucleic acid binding Exonuclease ABC subunit a SOS response excision ProDom  
2704 Signal transducer Dopamine receptor. G-protein coupled ProDom 
1984 Signal transducer Receptor polypeptide gastric inhibitory precursor (GIP-R) ProDom  
3023 Signal transducer Receptor precursor repeat glycoprotein ProDom 
1981 Signal transducer SL cytokine precursor (FLT3 ligand) ProDom  
3001 Signal transducer Tyrosine-protein kinase JAK3 ProDom  
2995 Signal transducer mapk/erk kinase kinase 1 ProDom  
2366 Signal transducer Gap junction cx32.7 ProDom  
2316 Signal transducer Chemotaxis protein transducer ProDom  
2316 Signal transducer HAMP domain/methyl-accepting chemotaxis protein (mcp) Pfam 
1925 Signal transducer Insulinlike receptor precursor ProDom  
2858 Signal transducer Tyrosine-protein kinase JAK3 ProDom  
3091 Transporter Transport protein precursor signal periplasmic ProDom 
1939 Transporter Calcium calcium-transporting ATPase plasma membrane ProDom 
Clone IDGene Ontology categoryDescriptionSearching tool
2405 Cell cycle regulator Cell division control protein 54 ProDom 
2073 Chaperone Heat shock 70-kd protein. ATP-binding; heat shock; ProDom  
2247 Enzyme Prenyltransferase and squalene oxidase Pfam  
2656 Enzyme E-class p450 group i signature (motif source owl:s22339) Prints  
2100 Enzyme Acetyl esterase ProDom  
2923 Enzyme Cyclase adenylate type ATP ProDom  
2632 Enzyme Sulfite reductase (NADPH) flavoprotein ProDom  
3121 Enzyme NOS-type oxidoreductase ProDom  
3332 Enzyme Nitrate reductase (NAD[P]H) ProDom  
2363 Enzyme Nitrate reductase ProDom 
2941 Enzyme Acyl-coA oxidase Pfam 
2255 Enzyme Dehydrogenase γ-glutamyl ProDom 
1860 Enzyme 3-isopropylmalate dehydrogenase precursor ProDom  
2247 Enzyme Farnesyltransferase β subunit ProDom  
1667 Enzyme DNA-directed DNA polymerase ProDom  
2148 Enzyme Preprotein translocase SECA subunit ProDom  
2821 Enzyme GlutathioneS-transferases Pfam  
3063 Enzyme inhibitor Trypsin inhibitor, serine protease inhibitor, 41 aa ProDom  
2940 Ligand binding Phosphoribulokinase/recF protein Pfam  
2839 Ligand binding Pyridine nucleotide disulfide reductase class-II signature Prints  
2199 Nucleic acid binding Ribosomal protein 40S S28 S33 repeat acetylation ProDom  
1248 Nucleic acid binding U1 small nuclear ribonucleoprotein ProDom  
2097 Nucleic acid binding Chromosome segregation protein SMC2 ProDom 
2097 Nucleic acid binding λ and other repressor helix-turn-helix signature Prints  
2625 Nucleic acid binding Protein ATP-binding ProDom  
2526 Nucleic acid binding Transmembrane protein HWLF3 late glycoprotein ProDom 
2524 Nucleic acid binding Elongation factor Tu mitochondrial precursor protein ProDom  
1998 Nucleic acid binding Ribosomal protein L20 signature Prints 
1497 Nucleic acid binding Protein homeobox DNA-binding ProDom  
3103 Nucleic acid binding Transcriptional regulator YCF30 protein transcription ProDom  
3132 Nucleic acid binding Double-stranded RNA-specific editase 1 ProDom 
2952 Nucleic acid binding Homeobox protein GSH-1 ProDom 
2940 Nucleic acid binding Exonuclease ABC subunit a SOS response excision ProDom  
2704 Signal transducer Dopamine receptor. G-protein coupled ProDom 
1984 Signal transducer Receptor polypeptide gastric inhibitory precursor (GIP-R) ProDom  
3023 Signal transducer Receptor precursor repeat glycoprotein ProDom 
1981 Signal transducer SL cytokine precursor (FLT3 ligand) ProDom  
3001 Signal transducer Tyrosine-protein kinase JAK3 ProDom  
2995 Signal transducer mapk/erk kinase kinase 1 ProDom  
2366 Signal transducer Gap junction cx32.7 ProDom  
2316 Signal transducer Chemotaxis protein transducer ProDom  
2316 Signal transducer HAMP domain/methyl-accepting chemotaxis protein (mcp) Pfam 
1925 Signal transducer Insulinlike receptor precursor ProDom  
2858 Signal transducer Tyrosine-protein kinase JAK3 ProDom  
3091 Transporter Transport protein precursor signal periplasmic ProDom 
1939 Transporter Calcium calcium-transporting ATPase plasma membrane ProDom 

NOS indicates nitric-oxide synthase.

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