Side-chain interactions in the putative spectrin self-association domain
Position in helix and residue . | Position in 106–amino acid motif . | Codon . | Interaction distance (Å)*,† . | Position in helix and residue . | Position in 106 amino acid motif . | Codon . | Interaction type . |
---|---|---|---|---|---|---|---|
Interacting residues between helix B and helix C | |||||||
B7-R | 43 | 2055 | 3.04 | C26-G | 101 | 46 | H-bond (±) |
B22-F | 58 | 2070 | 4.93 | C11-V | 86 | 31 | Hydrophobic |
B18-W | 54 | 2066 | 3.52 | C15-Y | 90 | 35 | Hydrophobic |
B18-W | 54 | 2066 | 3.50 | C18-F | 93 | 38 | Hydrophobic |
B11-F | 47 | 2059 | 3.15 | C22-V | 97 | 42 | Hydrophobic |
B11-F | 47 | 2059 | 4.57 | C23-A | 98 | 43 | Hydrophobic |
B4-L | 40 | 2052 | 3.41 | C29-L | 104 | 49 | Hydrophobic |
Interacting residues between helix A and helix C | |||||||
A11-A | 11 | 2018 | 2.76 | C7-R | 82 | 28 | H-bond |
A15-E | 15 | 2022 | 3.04 | C7-R | 82 | 28 | H-bond (±) |
A22-E | 22 | 2029 | 2.79 | C21-R | 96 | 41 | H-bond |
A7-F | 7 | 2014 | 4.07 | C4-I | 79 | 24 | Hydrophobic |
A25-L | 25 | 2032 | 3.74 | C18-F | 93 | 38 | Hydrophobic |
A15-E | 15 | 2022 | 3.81 | C7-R | 82 | 27 | Salt bridge |
A15-E | 15 | 2022 | 4.94 | C14-R | 89 | 34 | Salt bridge |
A22-E | 22 | 2029 | 4.53 | C21-R | 96 | 41 | Salt bridge |
Interacting residues between helix A and helix B | |||||||
A3-E | 3 | 2010 | 4.68 | B36-R | 72 | 2079 | Salt bridge |
A7-F | 7 | 2014 | 5.35 | B25-L | 61 | 2068 | Hydrophobic (±) |
Position in helix and residue . | Position in 106–amino acid motif . | Codon . | Interaction distance (Å)*,† . | Position in helix and residue . | Position in 106 amino acid motif . | Codon . | Interaction type . |
---|---|---|---|---|---|---|---|
Interacting residues between helix B and helix C | |||||||
B7-R | 43 | 2055 | 3.04 | C26-G | 101 | 46 | H-bond (±) |
B22-F | 58 | 2070 | 4.93 | C11-V | 86 | 31 | Hydrophobic |
B18-W | 54 | 2066 | 3.52 | C15-Y | 90 | 35 | Hydrophobic |
B18-W | 54 | 2066 | 3.50 | C18-F | 93 | 38 | Hydrophobic |
B11-F | 47 | 2059 | 3.15 | C22-V | 97 | 42 | Hydrophobic |
B11-F | 47 | 2059 | 4.57 | C23-A | 98 | 43 | Hydrophobic |
B4-L | 40 | 2052 | 3.41 | C29-L | 104 | 49 | Hydrophobic |
Interacting residues between helix A and helix C | |||||||
A11-A | 11 | 2018 | 2.76 | C7-R | 82 | 28 | H-bond |
A15-E | 15 | 2022 | 3.04 | C7-R | 82 | 28 | H-bond (±) |
A22-E | 22 | 2029 | 2.79 | C21-R | 96 | 41 | H-bond |
A7-F | 7 | 2014 | 4.07 | C4-I | 79 | 24 | Hydrophobic |
A25-L | 25 | 2032 | 3.74 | C18-F | 93 | 38 | Hydrophobic |
A15-E | 15 | 2022 | 3.81 | C7-R | 82 | 27 | Salt bridge |
A15-E | 15 | 2022 | 4.94 | C14-R | 89 | 34 | Salt bridge |
A22-E | 22 | 2029 | 4.53 | C21-R | 96 | 41 | Salt bridge |
Interacting residues between helix A and helix B | |||||||
A3-E | 3 | 2010 | 4.68 | B36-R | 72 | 2079 | Salt bridge |
A7-F | 7 | 2014 | 5.35 | B25-L | 61 | 2068 | Hydrophobic (±) |