ATM mutations in CLL patients with type B p53 dysfunction
Case . | Mutation . | Predicted codon change . | Presence of mutation at DNA level . | Other changes . |
---|---|---|---|---|
6 | 404 delC | Frameshift at 135 | Yes | 6795 C→T (silent F→F) |
1426 insA | Frameshift at 475 | Yes | ||
8 | 3848 T→C | 1283 L→P | ND | |
5945 A→C | 1982 Q→P | ND | ||
19 | IVS7-4delT | Not clear4-150 | Yes | |
IVS11-2insT | Not clear4-150 | Yes | ||
7205 A→G | 2402 E→G | Yes | ||
24 | 2875 del2nt | Frameshift at 959 | ND | 4473 C→T (silent F→F) |
35 | 5188 C→T | 1730 R→stop | ND | |
6056 A→G | 2019 Y→C | ND | ||
36 | 5134 T→A | 1712 F→I | ND | |
40 | 8535 del5nt | 2845 W→stop | Yes |
Case . | Mutation . | Predicted codon change . | Presence of mutation at DNA level . | Other changes . |
---|---|---|---|---|
6 | 404 delC | Frameshift at 135 | Yes | 6795 C→T (silent F→F) |
1426 insA | Frameshift at 475 | Yes | ||
8 | 3848 T→C | 1283 L→P | ND | |
5945 A→C | 1982 Q→P | ND | ||
19 | IVS7-4delT | Not clear4-150 | Yes | |
IVS11-2insT | Not clear4-150 | Yes | ||
7205 A→G | 2402 E→G | Yes | ||
24 | 2875 del2nt | Frameshift at 959 | ND | 4473 C→T (silent F→F) |
35 | 5188 C→T | 1730 R→stop | ND | |
6056 A→G | 2019 Y→C | ND | ||
36 | 5134 T→A | 1712 F→I | ND | |
40 | 8535 del5nt | 2845 W→stop | Yes |
Tumor cells from the 7 patients with type B p53 dysfunction were subjected to ATM mutation analysis. Eight overlappingATM fragments were obtained for each patient and analyzed by both REF and sequencing of the complete coding region of theATM gene. Mutations were confirmed at the DNA level where indicated. Nucleotide positions relate to cDNA and are numbered from the ATG codon. ND, not done.
Two of the mutations in patient 19 were identified at the DNA level only. Their consequences at the RNA and protein levels cannot, therefore, be entirely predicted. However, both errors are located at the intron/exon boundary, and it is likely that they result in the skipping of exons 8 and 12, respectively.