Table 1.

Transcript profile in LPS-stimulated mature DCs (MADCs)

Tag no.SAGE tagUniGene clusterDescription
831 GGCACAAAGG 56742 TARC 
617 TTGGGGTTTC 62954 Ferritin, heavy polypeptide 1 
655 GTTGTGGTTA 75415 β-2-microglobulin 
338 AACGGGGCCC 97203 MDC 
272 GTTCACATTA 84298 CD74 antigen 
255 GGGGAAATCG 76293 Thymosin beta 10 
238 CCTGTAATCC  Multiple match 
211 TGTGTTGAGA 181185 Eukaryotic translation elongation factor-1 α 1  
210 CAAATCCAAA 255996 Germinal center kinase–related protein kinase 
208 TTGGTGAAGG 75968 Thymosin, beta 4, X chromosome 
183 CTGACCTGTG 77961 Major histocompatibility complex, class I, B  
175 CCCTGGGTTC 111334 Ferritin, light polypeptide  
172 GTGCGCTGAG 77961 Major histocompatibility complex, class I. C  
188 GGCTGGGGGC 75721 Profilin 1 
168 CCCATCGTCC 249495 Ribosomal protein S8 
155 GTGAAACCCC  Multiple match 
154 CAAGCATCCC  No match 
148 ATAGTAGCTT 118400 Actin-bundling protein 
147 CCACTGCACT  Multiple match 
128 GCTTTATTTG 180852 Actin, gamma 1 
111 GTGCACTGAG 181244 Major histocompatibility complex, class I, A or C (77961)  
110 TCCGTGGTTG 78516 Neuronal tissue–enriched acidic protein 
110 TTGGTCCTCT 108124 Homosapiens mRNA for homolog to yeast ribosomal protein L41 
108 CGCCGACGAT 21205 Interferon-α–inducible protein (clone IFI-8-16)  
105 GCAGCCATCC 4437 Ribosomal protein L28 
103 GCCTGCTGGG 2706 Glutathione peroxidase 4 (phospholipid hydroperoxidase)  
99 GCCATAAAAT 1908 Proteoglycan 1, secretory granule  
94 TGTCCTGGTT 179685 Cyclin-dependent kinase inhibitor 1A (p21, Cp1)  
83 GTGAAACCCT  Multiple match  
92 CACCTAATTG 181353 Pre–B-cell colony-enhancing factor  
92 AATCTGCGCC 833 Interferon-stimulated protein, 15 kd  
81 TTTTCTGAAA 78138 Thioredoxin 
81 ACTTTTTCAA 149587 Homo sapiens mRNA; cDNA DKFZpS64E1616 (from clone DKFZpS84E1616)  
76 CTAAGACTTC  No match 
74 TGCAGCACGA 77961 Major histocompatibility complex, class I, C  
74 TGCCTGCACC 135084 Cystatin C 
71 GCCCCCAATA 188261 Lectin, galactoside-binding, soluble, 1 (galactin 1)  
71 ACCCTTGGCC  No match 
70 ACGCAGGGAG 180532 Human heart mRNA for heat-shock protein 90, partial cos  
68 GTGCTGAATG 77385 Myosin, light polypeptide 6, alkali, smooth muscle and nonmuscle 
67 TTCTGCTTTC 1852 CCR7 
66 GTAGCGCCTC 143212 Cystatin F (leukocystatin) 
66 GACGGCGCAG 73946 Endothelial cell growth factor 1 (platelet derived)  
64 GGGCATCTCT 76607 Human HLA-DR α-chain mRNA  
61 TTGGCCAGGC  Multiple match 
59 CCATTGCACT 194382 Ataxia telenglactasia mutated (includes complementation groups A, C, and D) 
59 GAAGCAGGAC 180370 Collin 1 (nonmuscle) 
59 ACTGTGGCGG 112242 ESTs  
59 TTCATACACC  No match  
59 CACAAACGGT 165453 Ribosomal protein S27 (metallopanstimulin 1) 
Tag no.SAGE tagUniGene clusterDescription
831 GGCACAAAGG 56742 TARC 
617 TTGGGGTTTC 62954 Ferritin, heavy polypeptide 1 
655 GTTGTGGTTA 75415 β-2-microglobulin 
338 AACGGGGCCC 97203 MDC 
272 GTTCACATTA 84298 CD74 antigen 
255 GGGGAAATCG 76293 Thymosin beta 10 
238 CCTGTAATCC  Multiple match 
211 TGTGTTGAGA 181185 Eukaryotic translation elongation factor-1 α 1  
210 CAAATCCAAA 255996 Germinal center kinase–related protein kinase 
208 TTGGTGAAGG 75968 Thymosin, beta 4, X chromosome 
183 CTGACCTGTG 77961 Major histocompatibility complex, class I, B  
175 CCCTGGGTTC 111334 Ferritin, light polypeptide  
172 GTGCGCTGAG 77961 Major histocompatibility complex, class I. C  
188 GGCTGGGGGC 75721 Profilin 1 
168 CCCATCGTCC 249495 Ribosomal protein S8 
155 GTGAAACCCC  Multiple match 
154 CAAGCATCCC  No match 
148 ATAGTAGCTT 118400 Actin-bundling protein 
147 CCACTGCACT  Multiple match 
128 GCTTTATTTG 180852 Actin, gamma 1 
111 GTGCACTGAG 181244 Major histocompatibility complex, class I, A or C (77961)  
110 TCCGTGGTTG 78516 Neuronal tissue–enriched acidic protein 
110 TTGGTCCTCT 108124 Homosapiens mRNA for homolog to yeast ribosomal protein L41 
108 CGCCGACGAT 21205 Interferon-α–inducible protein (clone IFI-8-16)  
105 GCAGCCATCC 4437 Ribosomal protein L28 
103 GCCTGCTGGG 2706 Glutathione peroxidase 4 (phospholipid hydroperoxidase)  
99 GCCATAAAAT 1908 Proteoglycan 1, secretory granule  
94 TGTCCTGGTT 179685 Cyclin-dependent kinase inhibitor 1A (p21, Cp1)  
83 GTGAAACCCT  Multiple match  
92 CACCTAATTG 181353 Pre–B-cell colony-enhancing factor  
92 AATCTGCGCC 833 Interferon-stimulated protein, 15 kd  
81 TTTTCTGAAA 78138 Thioredoxin 
81 ACTTTTTCAA 149587 Homo sapiens mRNA; cDNA DKFZpS64E1616 (from clone DKFZpS84E1616)  
76 CTAAGACTTC  No match 
74 TGCAGCACGA 77961 Major histocompatibility complex, class I, C  
74 TGCCTGCACC 135084 Cystatin C 
71 GCCCCCAATA 188261 Lectin, galactoside-binding, soluble, 1 (galactin 1)  
71 ACCCTTGGCC  No match 
70 ACGCAGGGAG 180532 Human heart mRNA for heat-shock protein 90, partial cos  
68 GTGCTGAATG 77385 Myosin, light polypeptide 6, alkali, smooth muscle and nonmuscle 
67 TTCTGCTTTC 1852 CCR7 
66 GTAGCGCCTC 143212 Cystatin F (leukocystatin) 
66 GACGGCGCAG 73946 Endothelial cell growth factor 1 (platelet derived)  
64 GGGCATCTCT 76607 Human HLA-DR α-chain mRNA  
61 TTGGCCAGGC  Multiple match 
59 CCATTGCACT 194382 Ataxia telenglactasia mutated (includes complementation groups A, C, and D) 
59 GAAGCAGGAC 180370 Collin 1 (nonmuscle) 
59 ACTGTGGCGG 112242 ESTs  
59 TTCATACACC  No match  
59 CACAAACGGT 165453 Ribosomal protein S27 (metallopanstimulin 1) 

The top 50 transcripts expressed in MADCs are listed. The tag sequence represents the 10-bp SAGE lag. UniGene clusters are listed. More information is available on the Internet athttp://www.prevent.m.u-tokyo.ac.jp/SAGE.html/.

View Large
Close Modal
This Feature Is Available To Subscribers Only

or Create an Account

Close Modal
Close Modal