Details of 8 novel ATRA–up-regulated genes
Gene name, perm (temp) . | Length, bp . | ORF, bp . | Peptides, aa . | Homology . | Accession No. . |
---|---|---|---|---|---|
hUCE(RIG-A) | 1223 | 48-506 | 153 | mouse UBcM4 | AF061736 |
hLAP(RIG-B) | 2147 | 187-1743 | 519 | leucine amino peptidase | AF061738 |
hWSB-1(RIG-C) | 2048 | 266-1528 | 421 | mouse WSB-1 | AF069313 |
hPTP(RIG-D) | 3610 | 73-2493 | 807 | mouse hematopoietic cell protein tyrosine phosphatase | AF077031 |
hRD(RIG-H) | 1390 | 8-976 | 323 | rat retinol dehydrogenase type III | AF067174 |
SIH001(RIG-J) | 1613 | 245-802 | 186 | mouse FMLCl1 (28.7% identities in 115 aa) | AF061739 |
SIH002(RIG-K) | 4347 | 0-2319 | 773 | human titin (31.2% identities in 415 aa) | AF077041 |
SIH003(RIG-L) | 2107 | 381-1331 | 317 | human ubiquitin C-terminal hydrolase (42.1% identities in 133 aa) | AF077040 |
Gene name, perm (temp) . | Length, bp . | ORF, bp . | Peptides, aa . | Homology . | Accession No. . |
---|---|---|---|---|---|
hUCE(RIG-A) | 1223 | 48-506 | 153 | mouse UBcM4 | AF061736 |
hLAP(RIG-B) | 2147 | 187-1743 | 519 | leucine amino peptidase | AF061738 |
hWSB-1(RIG-C) | 2048 | 266-1528 | 421 | mouse WSB-1 | AF069313 |
hPTP(RIG-D) | 3610 | 73-2493 | 807 | mouse hematopoietic cell protein tyrosine phosphatase | AF077031 |
hRD(RIG-H) | 1390 | 8-976 | 323 | rat retinol dehydrogenase type III | AF067174 |
SIH001(RIG-J) | 1613 | 245-802 | 186 | mouse FMLCl1 (28.7% identities in 115 aa) | AF061739 |
SIH002(RIG-K) | 4347 | 0-2319 | 773 | human titin (31.2% identities in 415 aa) | AF077041 |
SIH003(RIG-L) | 2107 | 381-1331 | 317 | human ubiquitin C-terminal hydrolase (42.1% identities in 133 aa) | AF077040 |
The major structural features of the 8 novel genes in the present work, including their temporary name of RIG (retinoic acid–induced gene), nucleic acid sequences, open reading frames (ORFs), and deduced amino acid sequences, are now available in GenBank.