Result of analysis of the 5′RACE PCR trapped sequence in the GenBank database
| Clone number . | Gene description . | 5′RACE flanking fragment size (bp) . | Overlap length (bp) . | % Identity in the overlap length . | GenBank accession number . |
|---|---|---|---|---|---|
| 50 | hnRNPL (RBM3) | 198 | 177 | 100 | (h) U28686 |
| 134 | NACA | 47 | 47 | 100 | (h) X80909 |
| 18 | hnRNPF | 86 | 28 | 97 | (h) AA310292 |
| 30 | Unknown | 111 | 62 | 82 | (m) D77412 |
| 165/(192) | Unknown | 170/33 | 127 | 100 | (h) AA38369 |
| 11 | Unknown | 175 | 50 | 94 | (h) AA77426 |
| 122 | Unknown | 114 | 106 | 97 | (h) AA326035 |
| G | Unknown | 79 | None | ||
| 31 | Jumonji | 353 | 202 | 99.5 | (m) D311967 |
| C | L18a | 44 | 44 | 100 | (r) X14181 |
| Clone number . | Gene description . | 5′RACE flanking fragment size (bp) . | Overlap length (bp) . | % Identity in the overlap length . | GenBank accession number . |
|---|---|---|---|---|---|
| 50 | hnRNPL (RBM3) | 198 | 177 | 100 | (h) U28686 |
| 134 | NACA | 47 | 47 | 100 | (h) X80909 |
| 18 | hnRNPF | 86 | 28 | 97 | (h) AA310292 |
| 30 | Unknown | 111 | 62 | 82 | (m) D77412 |
| 165/(192) | Unknown | 170/33 | 127 | 100 | (h) AA38369 |
| 11 | Unknown | 175 | 50 | 94 | (h) AA77426 |
| 122 | Unknown | 114 | 106 | 97 | (h) AA326035 |
| G | Unknown | 79 | None | ||
| 31 | Jumonji | 353 | 202 | 99.5 | (m) D311967 |
| C | L18a | 44 | 44 | 100 | (r) X14181 |
Overlap length is represented as the number of nucleotides present in the 5′RACE PCR sequence matching a GenBank sequence over the total length of the 5′RACE PCR sequence. The sequence of the known gene is present in the 5′RACE PCR sequence for clones 50, 31, 134, and C. For clone 18, the 5′RACE PCR sequence is contained in an EST sequence (AA310292) from which the 3′end overlaps (208/1902) with the 5′end sequence encoding an hnRNPF(L28010). % Identity is calculated with the number of nucleotides with a complete match in the overlapping GenBank sequence. (h) human; (m) mouse; (r) rat.