Table 1.

Sequences of clonotypic antigen receptor gene rearrangements

Pts IgH
D N J VDJ
1  gtattacgatattttgactggttattataac  cctcg aactggttcgacc  VH4-D3-10-J5  
2  tagtagtaccagctgctat tgaggggg ttggtactactacggtat VH6-D2-2-J6  
3   ataagttcgatagctgctcgc gactactgggcc VH1-(?D)-J4 
 TCRG  
rowV  N  J  VJ  
ccacctgggac cgggg tattataagaaactctttg TCRGV1S3J1S3  
ccacctgggatg  agtcttc ttataagaaactctttggcag TCRGV1S4J1S3 
Pts IgH
D N J VDJ
1  gtattacgatattttgactggttattataac  cctcg aactggttcgacc  VH4-D3-10-J5  
2  tagtagtaccagctgctat tgaggggg ttggtactactacggtat VH6-D2-2-J6  
3   ataagttcgatagctgctcgc gactactgggcc VH1-(?D)-J4 
 TCRG  
rowV  N  J  VJ  
ccacctgggac cgggg tattataagaaactctttg TCRGV1S3J1S3  
ccacctgggatg  agtcttc ttataagaaactctttggcag TCRGV1S4J1S3 

Pts: patients; patients 1 and 2 had a pro-B ALL; patient 3, a common ALL; patients 4 and 5, a T-lineage ALL. They were screened for the presence of preleukemic/leukemic cells in their neonatal blood spots by the use of ASO-PCR. The sequences are subdivided into V (variable), D (diversity), and J (joining) regions. N are the candidate nucleotides for template-independent insertion, D are the residual nucleotides of the D regions, and J the 5′ end of the J regions. The V(D)J combinations are shown. Underlined sequences indicate the position of the leukemia clone-specific primers. In patient 1, the primer was placed into the VD junction (gccagaggagggtagtattacg).

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