Shared CDR3 Motifs
Motif . | Case . | Clone . | CDR35-150 . |
---|---|---|---|
β1 | 2 | 1 | SESKDRGSETQ |
2 | 6 | SLDKAGTE A | |
α1 | 1 | 2 | VLGGSNYKL |
6 | 5 | VLGGSNYKL | |
α2 | 3 | 6 | VNTGNQF |
7 | 2 | FNTGNQF | |
α3 | 6 | 2 | YRSATGANSKL |
6 | 3 | YRSVYNTDKL |
Motif . | Case . | Clone . | CDR35-150 . |
---|---|---|---|
β1 | 2 | 1 | SESKDRGSETQ |
2 | 6 | SLDKAGTE A | |
α1 | 1 | 2 | VLGGSNYKL |
6 | 5 | VLGGSNYKL | |
α2 | 3 | 6 | VNTGNQF |
7 | 2 | FNTGNQF | |
α3 | 6 | 2 | YRSATGANSKL |
6 | 3 | YRSVYNTDKL |
Amino acids shown in bold are identical; conservative differences are underlined. Gaps are introduced to maximize line-up of like amino acids. CDR3s were defined as those amino acids beginning at the third (second for α) amino acid 3′ of the terminal 3′ V-region cysteine and ending three nucleotides 5′ of the J-region motif GXG.