Oligonucleotides Used in RT or PCR Experiments
| Primer Sequence . | Location . | |
|---|---|---|
| ;I. GC (GAATTC) CTCTGAAGGTTCCAGAATCGATAG | S | Anchor-150 |
| ;II. AGAAGTGATTTGTTCGAGGGTC | S | -151 |
| ;III. GGACCCTCAGCCCTGGACC | AS | ‡ |
| ;IV. CCAGAACGCGGTCGGCCCG | S | 61-79 |
| ;V. TTCTCTGAGTTCTTCCTGAGC | AS | 680-660 |
| ;VI. AGCAGTATGAAAGTACCATCGG | S | 1558-1579 |
| ;VII. GTTTACTTGCTGTACGCTCG | AS | 1800-1781 |
| ;VIII. CTGTCGATTCGGCAGACCGA | S | 1831-1850 |
| ;IX. TCTGTGCTTTAGGGACCACTG | AS | 1953-1933 |
| ;X. GC (GAATTC) GATCTCCTCTTGACTCTTG | AS | 2180-2162 |
| ;XI. GCTCACTGATGCTGGCATGATG | AS | 2208-2187 |
| ;XII. GC (GAATTC) GGTGAGTGAGTGGATAAGCGT | AS | 2284-2264 |
| XIII. AGAGCCCACAGAAGCATGGA | S | 2012-2031 |
| ;XIV. TCACTTTTCACAGCATTGGCATTATCT | AS | 2392-2366 |
| ;XV. GACAAGAGTCAAGAGGAGATC | S | 2160-2180 |
| ;XVI. AAGGGCAGAGTTGGGGTAGG | AS | 2774-2755 |
| Primer Sequence . | Location . | |
|---|---|---|
| ;I. GC (GAATTC) CTCTGAAGGTTCCAGAATCGATAG | S | Anchor-150 |
| ;II. AGAAGTGATTTGTTCGAGGGTC | S | -151 |
| ;III. GGACCCTCAGCCCTGGACC | AS | ‡ |
| ;IV. CCAGAACGCGGTCGGCCCG | S | 61-79 |
| ;V. TTCTCTGAGTTCTTCCTGAGC | AS | 680-660 |
| ;VI. AGCAGTATGAAAGTACCATCGG | S | 1558-1579 |
| ;VII. GTTTACTTGCTGTACGCTCG | AS | 1800-1781 |
| ;VIII. CTGTCGATTCGGCAGACCGA | S | 1831-1850 |
| ;IX. TCTGTGCTTTAGGGACCACTG | AS | 1953-1933 |
| ;X. GC (GAATTC) GATCTCCTCTTGACTCTTG | AS | 2180-2162 |
| ;XI. GCTCACTGATGCTGGCATGATG | AS | 2208-2187 |
| ;XII. GC (GAATTC) GGTGAGTGAGTGGATAAGCGT | AS | 2284-2264 |
| XIII. AGAGCCCACAGAAGCATGGA | S | 2012-2031 |
| ;XIV. TCACTTTTCACAGCATTGGCATTATCT | AS | 2392-2366 |
| ;XV. GACAAGAGTCAAGAGGAGATC | S | 2160-2180 |
| ;XVI. AAGGGCAGAGTTGGGGTAGG | AS | 2774-2755 |
The location of nucleotides is given within the sequence published by Conboy et al.15
Abbreviations: S, sense strand; AS, antisense strand.
Sequence complementary to the anchor used in the Amplifinder kit (Clontech).
‡Genomic sequences isolated from the W27 clone23; they are located upstream and downstream from exon 1, respectively.23