Table 3.

Monogenetic defects associated with common variable immune deficiency

DefectGeneInheritanceLaboratory findingsClinical findings
BAFF receptor deficiency TNFRSF13C (BAFF-R) AR Low IgG and IgM, normal IgA Not fully penetrant, infection only 
TWEAK deficiency TWEAK (TNFSF12) AD Low IgM and A, lack of antipneumococcal antibody Pneumonia, bacterial infections, warts, thrombocytopenia; neutropenia 
ICOS ICOS AR Low IgG and IgA and/or IgM Fully penetrant, mostly bacterial infection, some lymphoproliferation and autoimmunity, combined immunodeficiency possible 
Severe loss of class-switched memory 
TACI deficiency TNFRSF13B (TACI) AD or AR Low IgG and IgA and/or IgM Not fully penetrant, bacterial infections, autoimmunity, and lymphoproliferation 
CD19 deficiency CD19 AR Low IgG and IgA and/or IgM Recurrent infections, may have IgA nephropathy 
CD81 deficiency CD81 AR Low IgG, low or normal IgA and IgM Recurrent infections, glomerulonephritis, Henoch-Schönlein purpura 
CD20 deficiency CD20 AR Low IgG, normal or elevated IgM and IgA Recurrent infections 
CD21 deficiency CR2 AR Low IgG, impaired antipneumococcal response Recurrent infections 
CD27 CD27 AR Hypogammaglobulinemia Recurrent infections; persistent EBV viremia 
PIK3CD mutation (GOF) PIK3CD GOF AD All isotypes decreased Severe bacterial infections; decreased or absent pro-B cells, herpesvirus and EBV disease 
NFKB1 deficiency NFKB1 AD Normal or low IgG, IgA, IgM, low or normal B cells, low memory B cells About 70% penetrant, recurrent sinopulmonary infections, EBV proliferation, autoimmune cytopenias, enteropathy, interstitial lung disease, aphthous lesions 
NFKB2 deficiency NFKB2 AD Low serum IgG, IgA, and IgM; low B-cell numbers Recurrent sinopulmonary infections, alopecia, and autoimmune endocrinopathies 
IKAROS deficiency IKZF1 AD Low IgG and IgA and/or IgM; reduced B-cell numbers Recurrent infections, ALL, some with autoimmunity 
IL21 deficiency IL21 AR Impaired B-cell differentiation Inflammatory bowel disease, infections 
IL21R deficiency IL21R AR Low IgG, defective class-switched B cells, and defective antibody responses Recurrent infections, cryptosporidial liver disease 
LRBA deficiency LRBA AR Hypogammaglobulinemia, low IgG and IgA defective class-switched B cells, expanded CD21low B cells Chronic interstitial lung disease; autoimmunity; inflammatory bowel disease; endocrinopathy; infections 
CTLA4 deficiency CTLA4 AD Hypogammaglobulinemia, low IgG and IgA; sometimes IgM, defective class-switched B cells, expanded CD21low B cells Not fully penetrant, mainly autoimmunity and inflammatory organ disease, infections, Hodgkin lymphoma 
PIK3CD deficiency PIK3CD AD, AR Hypogammaglobulinemia, increased IgM, defective class-switched B cells, expanded CD21low B cells, expanded CD57+ CD8 T cells Recurrent infections, lymphoproliferation; autoimmunity, B-cell lymphoma 
PIK3R1 deficiency PIK3R1 AD; AR Hypogammaglobulinemia, increased IgM, defective class-switched B cells, expanded CD21low B cells Recurrent infections, lymphoproliferation; B-cell lymphoma; neurodevelopmental delay 
IRF2BP2 deficiency IRF2BP2 AD Hypogammaglobulinemia Recurrent infections, colitis 
DefectGeneInheritanceLaboratory findingsClinical findings
BAFF receptor deficiency TNFRSF13C (BAFF-R) AR Low IgG and IgM, normal IgA Not fully penetrant, infection only 
TWEAK deficiency TWEAK (TNFSF12) AD Low IgM and A, lack of antipneumococcal antibody Pneumonia, bacterial infections, warts, thrombocytopenia; neutropenia 
ICOS ICOS AR Low IgG and IgA and/or IgM Fully penetrant, mostly bacterial infection, some lymphoproliferation and autoimmunity, combined immunodeficiency possible 
Severe loss of class-switched memory 
TACI deficiency TNFRSF13B (TACI) AD or AR Low IgG and IgA and/or IgM Not fully penetrant, bacterial infections, autoimmunity, and lymphoproliferation 
CD19 deficiency CD19 AR Low IgG and IgA and/or IgM Recurrent infections, may have IgA nephropathy 
CD81 deficiency CD81 AR Low IgG, low or normal IgA and IgM Recurrent infections, glomerulonephritis, Henoch-Schönlein purpura 
CD20 deficiency CD20 AR Low IgG, normal or elevated IgM and IgA Recurrent infections 
CD21 deficiency CR2 AR Low IgG, impaired antipneumococcal response Recurrent infections 
CD27 CD27 AR Hypogammaglobulinemia Recurrent infections; persistent EBV viremia 
PIK3CD mutation (GOF) PIK3CD GOF AD All isotypes decreased Severe bacterial infections; decreased or absent pro-B cells, herpesvirus and EBV disease 
NFKB1 deficiency NFKB1 AD Normal or low IgG, IgA, IgM, low or normal B cells, low memory B cells About 70% penetrant, recurrent sinopulmonary infections, EBV proliferation, autoimmune cytopenias, enteropathy, interstitial lung disease, aphthous lesions 
NFKB2 deficiency NFKB2 AD Low serum IgG, IgA, and IgM; low B-cell numbers Recurrent sinopulmonary infections, alopecia, and autoimmune endocrinopathies 
IKAROS deficiency IKZF1 AD Low IgG and IgA and/or IgM; reduced B-cell numbers Recurrent infections, ALL, some with autoimmunity 
IL21 deficiency IL21 AR Impaired B-cell differentiation Inflammatory bowel disease, infections 
IL21R deficiency IL21R AR Low IgG, defective class-switched B cells, and defective antibody responses Recurrent infections, cryptosporidial liver disease 
LRBA deficiency LRBA AR Hypogammaglobulinemia, low IgG and IgA defective class-switched B cells, expanded CD21low B cells Chronic interstitial lung disease; autoimmunity; inflammatory bowel disease; endocrinopathy; infections 
CTLA4 deficiency CTLA4 AD Hypogammaglobulinemia, low IgG and IgA; sometimes IgM, defective class-switched B cells, expanded CD21low B cells Not fully penetrant, mainly autoimmunity and inflammatory organ disease, infections, Hodgkin lymphoma 
PIK3CD deficiency PIK3CD AD, AR Hypogammaglobulinemia, increased IgM, defective class-switched B cells, expanded CD21low B cells, expanded CD57+ CD8 T cells Recurrent infections, lymphoproliferation; autoimmunity, B-cell lymphoma 
PIK3R1 deficiency PIK3R1 AD; AR Hypogammaglobulinemia, increased IgM, defective class-switched B cells, expanded CD21low B cells Recurrent infections, lymphoproliferation; B-cell lymphoma; neurodevelopmental delay 
IRF2BP2 deficiency IRF2BP2 AD Hypogammaglobulinemia Recurrent infections, colitis 

Adapted from Picard et al.48 

AD, autosomal dominant; ALL, acute lymphoblastic leukemia; AR, autosomal recessive; EBV, Epstein-Barr virus; GOF, gain of function; IgA, immunoglobulin A; IgG, immunoglobulin G; IgM, immunoglobulin M.

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