Summary of LANA-specific CD4+ T-cell clones
Donor . | Peptide pool . | Amino acid coordinates* . | Peptide . | Restriction . | Functional avidity . |
---|---|---|---|---|---|
B1 | P | 36-50 | GDDLHLQPRRKHVAD | DR13 | 10−7 |
B1 | Q | 76-90 | PAFVSSPTLPVAPIP | DQ6 | 10−7 |
B1 | R | 191-205 | LAPSTLRSLRKRRLS | DP1 | 10−8 |
B1 | S | 196-210 | LRSLRKRRLSSPQGP | DR13 | 10−6 |
B1 | R/S | 191- | LAPSTLRSLRKRRLS | DQ6 | 10−8 |
-210 | LRSLRKRRLSSPQGP | ||||
B1 | T | 276-290 | WGDDTAMLVLLAEIA | DQ6 | 10−8 |
B1 | V | 981-996 | EYRYVLRTSPPHRPG | DQ6 | 10−8 |
B1 | W | 1052-1066 | CQWKFAVIFWGNDPY | DR52c | 10−6 |
B1 | W | 1077-1091 | FGGVKAGPVSCLPHP | DP11 | nd |
G48 | Q | 66-80 | GSPTVFTSGLPAFVS | DQ7 | 10−7 |
G48 | Q | 76-90 | PAFVSSPTLPVAPIP | DQ7 | 10−6 |
G29 | Q | 76-90 | PAFVSSPTLPVAPIP | DR52b | 10−8 |
G18 | W | 1047-1061 | RRDPKCQWKFAVIFW | nd | nd |
Donor . | Peptide pool . | Amino acid coordinates* . | Peptide . | Restriction . | Functional avidity . |
---|---|---|---|---|---|
B1 | P | 36-50 | GDDLHLQPRRKHVAD | DR13 | 10−7 |
B1 | Q | 76-90 | PAFVSSPTLPVAPIP | DQ6 | 10−7 |
B1 | R | 191-205 | LAPSTLRSLRKRRLS | DP1 | 10−8 |
B1 | S | 196-210 | LRSLRKRRLSSPQGP | DR13 | 10−6 |
B1 | R/S | 191- | LAPSTLRSLRKRRLS | DQ6 | 10−8 |
-210 | LRSLRKRRLSSPQGP | ||||
B1 | T | 276-290 | WGDDTAMLVLLAEIA | DQ6 | 10−8 |
B1 | V | 981-996 | EYRYVLRTSPPHRPG | DQ6 | 10−8 |
B1 | W | 1052-1066 | CQWKFAVIFWGNDPY | DR52c | 10−6 |
B1 | W | 1077-1091 | FGGVKAGPVSCLPHP | DP11 | nd |
G48 | Q | 66-80 | GSPTVFTSGLPAFVS | DQ7 | 10−7 |
G48 | Q | 76-90 | PAFVSSPTLPVAPIP | DQ7 | 10−6 |
G29 | Q | 76-90 | PAFVSSPTLPVAPIP | DR52b | 10−8 |
G18 | W | 1047-1061 | RRDPKCQWKFAVIFW | nd | nd |
nd indicates not determined.
Coordinate location based on the BC-1 LANA sequence.