Summary of SIV insertion site characteristics versus random in silico–generated integration datasets
. | All SIV, n = 519, no. (%) . | Matching randoms, % . | P vs randoms . |
---|---|---|---|
Sites within a gene | 392 (75.5) | 32.9 | < .001 |
Sites within a CpG island or within a 1-kb window of CpG island | 1 (0.2) | 1.0 | .040 |
Distribution of sites relative to gene density within 1-Mb window | |||
0-10 genes | 33.3 | 79.4 | < .001 |
11-20 genes | 29.5 | 15.5 | < .001 |
More than 21 genes | 37.2 | 5.1 | < .001 |
. | All SIV, n = 519, no. (%) . | Matching randoms, % . | P vs randoms . |
---|---|---|---|
Sites within a gene | 392 (75.5) | 32.9 | < .001 |
Sites within a CpG island or within a 1-kb window of CpG island | 1 (0.2) | 1.0 | .040 |
Distribution of sites relative to gene density within 1-Mb window | |||
0-10 genes | 33.3 | 79.4 | < .001 |
11-20 genes | 29.5 | 15.5 | < .001 |
More than 21 genes | 37.2 | 5.1 | < .001 |