Table 2

Probe sets uniquely down-regulated in deletional tolerance

Affymetrix probe IDGene symbolGene nameLog fold changeAssociation with T-cell tolerance?
1417184_s_at Hbb-bh1 Hemoglobin, beta adult major chain −10.2 No 
1436996_x_at Lzp-s Lysozyme −5.15 No 
1436853_a_at Snca Synuclein, alpha −5.09 No 
1417898_a_at Gzma Granzyme A −4.55 Yes 
1435290_x_at H2-Aa Histocompatibility 2, class II antigen A, alpha −4.34 No 
1439426_x_at Lyzs Lysozyme −4.34 No 
1438858_x_at H2-Aa Histocompatibility 2, class II antigen A, alpha −3.05 No 
1459641_at Psmb2 Proteasome (prosome, macropain) subunit, beta type 2 −2.35 No 
1425822_a_at Dtx1 Deltex 1 homolog (Drosophila−2.08 No 
1417185_at Ly6a Lymphocyte antigen 6 complex, locus A −1.81 No 
1444283_at Gimap7 GTPase, IMAP family member 7 −1.67 No 
1436845_at Axin2 Axin2 −1.66 No 
1421571_a_at Ly6c Lymphocyte antigen 6 complex, locus C −1.64 Yes6,20  
1417398_at Rras2 Related RAS viral (r-ras) oncogene homolog 2 −1.63 No 
1454666_at Klf3 Kruppel-like factor 3 (basic) −1.54 No 
1449181_at Fech Ferrochelatase −1.47 No 
1438442_at AI450236 Expressed sequence AI450236 −1.38 No 
1450431_a_at Nedd4 Neural precursor cell expressed, developmentally down-regulated gene 4 −1.34 No 
1450240_a_at Sytl1 Synaptotagmin-like 1 −1.13 No 
1456545_at Il18rap Interleukin-18 receptor accessory protein −1.12 Putative 
1429723_at 6330409N04Rik RIKEN cDNA 6330409N04 gene −1.1 No 
Affymetrix probe IDGene symbolGene nameLog fold changeAssociation with T-cell tolerance?
1417184_s_at Hbb-bh1 Hemoglobin, beta adult major chain −10.2 No 
1436996_x_at Lzp-s Lysozyme −5.15 No 
1436853_a_at Snca Synuclein, alpha −5.09 No 
1417898_a_at Gzma Granzyme A −4.55 Yes 
1435290_x_at H2-Aa Histocompatibility 2, class II antigen A, alpha −4.34 No 
1439426_x_at Lyzs Lysozyme −4.34 No 
1438858_x_at H2-Aa Histocompatibility 2, class II antigen A, alpha −3.05 No 
1459641_at Psmb2 Proteasome (prosome, macropain) subunit, beta type 2 −2.35 No 
1425822_a_at Dtx1 Deltex 1 homolog (Drosophila−2.08 No 
1417185_at Ly6a Lymphocyte antigen 6 complex, locus A −1.81 No 
1444283_at Gimap7 GTPase, IMAP family member 7 −1.67 No 
1436845_at Axin2 Axin2 −1.66 No 
1421571_a_at Ly6c Lymphocyte antigen 6 complex, locus C −1.64 Yes6,20  
1417398_at Rras2 Related RAS viral (r-ras) oncogene homolog 2 −1.63 No 
1454666_at Klf3 Kruppel-like factor 3 (basic) −1.54 No 
1449181_at Fech Ferrochelatase −1.47 No 
1438442_at AI450236 Expressed sequence AI450236 −1.38 No 
1450431_a_at Nedd4 Neural precursor cell expressed, developmentally down-regulated gene 4 −1.34 No 
1450240_a_at Sytl1 Synaptotagmin-like 1 −1.13 No 
1456545_at Il18rap Interleukin-18 receptor accessory protein −1.12 Putative 
1429723_at 6330409N04Rik RIKEN cDNA 6330409N04 gene −1.1 No 

Log fold change represents log (base 2) fold change.

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