Oligonucleotide primers used for RT-PCR analysis
Genes . | Primer sequences, 5′-3′ . | Annealing temp, °C . | Cycle . | Size, bp* . | |
---|---|---|---|---|---|
Forward . | Reverse . | ||||
Hprt | GCTGGTGAAAAGGACCTCT | CACAGGACTAGAACACCTGC | 59 | 28 or QPCR | 280 |
Alk1 | TGCCTGTTCAGATGCCTTCAG | CTTGGGGAGCTTCAGAAGGGG | 59 | QPCR | 502 |
Bmpr2 | TGGCAGTGAGGTCACTCAAG | TTGCGTTCATTCTGCATAGC | 53 | QPCR | 178 |
Acvr2a | AGCAAGGGGAAGATTTGGTT | GGTGCCTCTTTTCTCTGCAC | 53 | QPCR | 168 |
Acvr2b | CTGTGCGACTCCTTTAAGC | TCTTCACAGCCACAAAGTCG | 54 | QPCR | 174 |
HPRT | TGCGACCTTGACCATCTTTGG | GCCATCACATTGTAGCCCTCT | 56 | QPCR | 358 |
ID1 | ATCAGGGACCTTCAGTTGGAGC | AGACCCACAGAGCACGTAATTCC | 60 | QPCR | 236 |
ID2 | TCCCAGGGTGTTCTCTTACTTGGACT | GGATCCTTCTGGTATTCACGCTCCA | 54 | QPCR | 200 |
GDF15 | ACGGGAGGTGCAAGTGACCATGTG | TGAGCACCATGGGATTGTTAGC | 61 | QPCR | 158 |
BMPRII | GCTAAAATTTGGCAGCAAGC | CTTGGGCCCTATGTGTCACT | 57 | QPCR | 224 |
ENG | CACTAGCCAGGTCTCGAAGG | CTGAGGACCAGAAGCACCTC | 57 | QPCR | 165 |
SMAD6 | AGGAGAAACTCGCTCCAAGTGCAT | AGCTCCCTTCTTACTCCCTGCAAA | 54 | QPCR | 152 |
SMAD7 | TCGGACAGCTCAATTCGGACAACA | AACACCTTGTGTACCAACAGCGTC | 54 | QPCR | 190 |
ALK1 | CCTTGCTGGCCCTGGTGGCCCT | GTGGGCAATGGCTGGTTTG | 63 | 30 | 607 |
ALK2 | GAAGGGCTCATCACCACCAAT | GAACGGTGGCTTGTAATCCTC | 56 | 26 | 771 |
ALK3 | GCACATTGCTTTGCCATCATA | CATTTGCCCATCCATACTTCT | 60 | 24 | 512 |
ALK6 | ACACCACAGGGCTTTACTTAT | AATTGCTGGTTTGCCTTGAGT | 56 | 30 | 616 |
Genes . | Primer sequences, 5′-3′ . | Annealing temp, °C . | Cycle . | Size, bp* . | |
---|---|---|---|---|---|
Forward . | Reverse . | ||||
Hprt | GCTGGTGAAAAGGACCTCT | CACAGGACTAGAACACCTGC | 59 | 28 or QPCR | 280 |
Alk1 | TGCCTGTTCAGATGCCTTCAG | CTTGGGGAGCTTCAGAAGGGG | 59 | QPCR | 502 |
Bmpr2 | TGGCAGTGAGGTCACTCAAG | TTGCGTTCATTCTGCATAGC | 53 | QPCR | 178 |
Acvr2a | AGCAAGGGGAAGATTTGGTT | GGTGCCTCTTTTCTCTGCAC | 53 | QPCR | 168 |
Acvr2b | CTGTGCGACTCCTTTAAGC | TCTTCACAGCCACAAAGTCG | 54 | QPCR | 174 |
HPRT | TGCGACCTTGACCATCTTTGG | GCCATCACATTGTAGCCCTCT | 56 | QPCR | 358 |
ID1 | ATCAGGGACCTTCAGTTGGAGC | AGACCCACAGAGCACGTAATTCC | 60 | QPCR | 236 |
ID2 | TCCCAGGGTGTTCTCTTACTTGGACT | GGATCCTTCTGGTATTCACGCTCCA | 54 | QPCR | 200 |
GDF15 | ACGGGAGGTGCAAGTGACCATGTG | TGAGCACCATGGGATTGTTAGC | 61 | QPCR | 158 |
BMPRII | GCTAAAATTTGGCAGCAAGC | CTTGGGCCCTATGTGTCACT | 57 | QPCR | 224 |
ENG | CACTAGCCAGGTCTCGAAGG | CTGAGGACCAGAAGCACCTC | 57 | QPCR | 165 |
SMAD6 | AGGAGAAACTCGCTCCAAGTGCAT | AGCTCCCTTCTTACTCCCTGCAAA | 54 | QPCR | 152 |
SMAD7 | TCGGACAGCTCAATTCGGACAACA | AACACCTTGTGTACCAACAGCGTC | 54 | QPCR | 190 |
ALK1 | CCTTGCTGGCCCTGGTGGCCCT | GTGGGCAATGGCTGGTTTG | 63 | 30 | 607 |
ALK2 | GAAGGGCTCATCACCACCAAT | GAACGGTGGCTTGTAATCCTC | 56 | 26 | 771 |
ALK3 | GCACATTGCTTTGCCATCATA | CATTTGCCCATCCATACTTCT | 60 | 24 | 512 |
ALK6 | ACACCACAGGGCTTTACTTAT | AATTGCTGGTTTGCCTTGAGT | 56 | 30 | 616 |
Size of the amplified cDNA.