Genes overexpressed in PTCL-u compared to AITL
| Gene symbol . | Gene title . | Fold difference of geometric means . |
|---|---|---|
| Ubiquitination | ||
| MLL3 | Myeloid/lymphoid or mixed-lineage leukemia 3 | 0.58 |
| MYLIP | Myosin regulatory light chain interacting protein | 0.57 |
| TRIM25 | Tripartite motif-containing 25 | 0.71 |
| TRIM38 | Tripartite motif-containing 38 | 0.63 |
| TRIM52 | Tripartite motif-containing 52 | 0.71 |
| USP8 | Ubiquitin specific peptidase 8 | 0.78 |
| Regulation of transcription | ||
| ADAR | Adenosine deaminase, RNA specific | 0.84 |
| ANKIB1 | Ankyrin repeat and IBR domain containing 1 | 0.6 |
| ELF2 | E74-like factor 2 (ets domain transcription factor) | 0.74 |
| HOXA7 | Homeobox A7 | 0.54 |
| ID2 | Inhibitor of DNA binding 2, dominant-negative helix-loop-helix protein | 0.49 |
| POU2F1 | POU domain, class 2, transcription factor 1 | 0.7 |
| PPARBP | PPAR binding protein | 0.59 |
| SP100 | Nuclear antigen Sp100 | 0.65 |
| SP110 | SP110 nuclear body protein | 0.61 |
| SP4 | Sp4 transcription factor | 0.71 |
| TAF1 | TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor | 0.74 |
| TFAP2A | Transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) | 0.52 |
| TRERF1 | Transcriptional regulating factor 1 | 0.42 |
| ZNF12 | Zinc finger protein 12 | 0.57 |
| ZNF148 | Zinc finger protein 148 (pHZ-52) | 0.68 |
| Immune response: chemotaxis | ||
| CCR7 | Chemokine (C-C motif) receptor 7 | 0.46 |
| CD47 | CD47 antigen (Rh-related antigen, integrin-associated signal transducer) | 0.61 |
| G1P2 | Interferon alpha-inducible protein (clone IFI-15K) | 0.58 |
| IFI44 | Interferon-induced protein 44 | 0.36 |
| IFI44L | Interferon-induced protein 44-like | 0.17 |
| IFIT2 | Interferon-induced protein with tetratricopeptide repeats 2 | 0.46 |
| IFIT3 | Interferon-induced protein with tetratricopeptide repeats 3 | 0.38 |
| Gene symbol . | Gene title . | Fold difference of geometric means . |
|---|---|---|
| Ubiquitination | ||
| MLL3 | Myeloid/lymphoid or mixed-lineage leukemia 3 | 0.58 |
| MYLIP | Myosin regulatory light chain interacting protein | 0.57 |
| TRIM25 | Tripartite motif-containing 25 | 0.71 |
| TRIM38 | Tripartite motif-containing 38 | 0.63 |
| TRIM52 | Tripartite motif-containing 52 | 0.71 |
| USP8 | Ubiquitin specific peptidase 8 | 0.78 |
| Regulation of transcription | ||
| ADAR | Adenosine deaminase, RNA specific | 0.84 |
| ANKIB1 | Ankyrin repeat and IBR domain containing 1 | 0.6 |
| ELF2 | E74-like factor 2 (ets domain transcription factor) | 0.74 |
| HOXA7 | Homeobox A7 | 0.54 |
| ID2 | Inhibitor of DNA binding 2, dominant-negative helix-loop-helix protein | 0.49 |
| POU2F1 | POU domain, class 2, transcription factor 1 | 0.7 |
| PPARBP | PPAR binding protein | 0.59 |
| SP100 | Nuclear antigen Sp100 | 0.65 |
| SP110 | SP110 nuclear body protein | 0.61 |
| SP4 | Sp4 transcription factor | 0.71 |
| TAF1 | TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor | 0.74 |
| TFAP2A | Transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) | 0.52 |
| TRERF1 | Transcriptional regulating factor 1 | 0.42 |
| ZNF12 | Zinc finger protein 12 | 0.57 |
| ZNF148 | Zinc finger protein 148 (pHZ-52) | 0.68 |
| Immune response: chemotaxis | ||
| CCR7 | Chemokine (C-C motif) receptor 7 | 0.46 |
| CD47 | CD47 antigen (Rh-related antigen, integrin-associated signal transducer) | 0.61 |
| G1P2 | Interferon alpha-inducible protein (clone IFI-15K) | 0.58 |
| IFI44 | Interferon-induced protein 44 | 0.36 |
| IFI44L | Interferon-induced protein 44-like | 0.17 |
| IFIT2 | Interferon-induced protein with tetratricopeptide repeats 2 | 0.46 |
| IFIT3 | Interferon-induced protein with tetratricopeptide repeats 3 | 0.38 |