Table 1

List of microRNAs carrying a predicted PML-RARA binding site in their promoter

MicroRNA namePredicted siteSite type
hsa-let-7a-2 TGGCCTTCTTGAACT DR3 
hsa-let-7a-3 TGGCCTGAGCTGACCG DR4 
hsa-let-7c TGAACTATTGTTGAACG DR5 
hsa-let-7d TAACCTGTTAAATTAGGTCA ER8 
hsa-mir-100 AGGTCAGGAGTTCA DR2 
hsa-mir-10b TGTTCAGACAGGTCA DR3 
hsa-mir-130a TGACCCAGTGAACT DR2 
hsa-mir-133b AGGCCAAGAAGTTCA DR3 
hsa-mir-135a-1 AGTTCATGACCT IR0 
hsa-mir-146a AGGTCAGGAGTTCA DR2 
hsa-mir-154 TGACCTCAGAATCATGGCCT DR8 
hsa-mir-183 mir-96 TGACCTTCTGGCCT DR2 
hsa-mir-194-2 mir-192 TAACCTCTCTGAACC DR3 
hsa-mir-196a-1 TGAACTCCTGACCT DR2 
hsa-mir-200c AGGTCAGCGAGGGGTCA DR5 
hsa-mir-205 TGACCTGCTCTGGACT DR4 
hsa-mir-210 TGACCCCTTGACCC DR2 
hsa-mir-217 TGAACTCCTGACCT DR2 
hsa-mir-22 TGAACTGGCCCTGACCC DR5 
hsa-mir-23a mir-27a mir-24-2 AGGCCAGGAGTTCA DR2 
hsa-mir-29b-2 TGACCCCATGAACC DR2 
hsa-mir-323 mir-758 TGACCTGCACTGCACC DR4 
hsa-mir-331 TGAACTCCTGGCCT DR2 
hsa-mir-345 TACCCTGGTGACCC DR2 
hsa-mir-34a AGGCCAGGAGTTCA DR2 
hsa-mir-365-2 AGGGCAGTAGAGGGTCA DR5 
hsa-mir-377 TGAACCATGTGACCG DR3 
hsa-mir-379 GGGGCATGAACT IR0 
hsa-mir-380 AGGTCAGTGAAGAGGCCA DR6 
hsa-mir-383 TGAACTCCTGACCT DR2 
hsa-mir-422a TGGCCTTGTTGACCT DR3 
hsa-mir-455 GGGTCACCCAGGGCCA DR4 
hsa-mir-497 mir-195 GGGCCAGGAGGTCA DR2 
hsa-mir-500 AGGTCAACAAAGTTCA DR4 
hsa-mir-507 mir-506 TGAACTCCTGGCCT DR2 
hsa-mir-513-2 AGGCCAGGTGCAGTGGGTCA DR8 
hsa-mir-516-1 AGGTCAGGAGTTCA DR2 
hsa-mir-516-3 TGAACTCCTGACCT DR2 
hsa-mir-517a TGACCTGGTCATGCACC DR5 
hsa-mir-518a-2 GGGTCACCTGAGGTCA DR4 
hsa-mir-518d TGAACTCCTGACCT DR2 
hsa-mir-519e AGGTCAGGAGTTCA DR2 
hsa-mir-520b AGTTCAGGAGTTCA DR2 
hsa-mir-520d TGGACTCCTGACCT DR2 
hsa-mir-520e AGGTCAGGAGTTCA DR2 
hsa-mir-520f AGGTCAGGAGTTCA DR2 
hsa-mir-521-2 TGAACTCCTGACCT DR2 
hsa-mir-524 AGTTCAGGAGTTCA DR2 
hsa-mir-527 TGCCCTCCAGCCTGGGTCA ER7 
hsa-mir-539 TGCACCAAGTTTGACCT DR5 
hsa-mir-548a-2 TGACCTCCTGGCCT DR2 
hsa-mir-551b TGACCTTCATTTTAACCT DR6 
hsa-mir-563 TGACCTTTCCCTGCACT DR5 
hsa-mir-573 AGGTTAGGAGTTCA DR2 
hsa-mir-583 TGGCCCCATGACCT DR2 
hsa-mir-607 TGAACTCCTGACCT DR2 
hsa-mir-612 TGAACTCCTGACCT DR2 
hsa-mir-613 AGGCCAGGAGTTCA DR2 
hsa-mir-622 AGGCCAGGCGGTCA DR2 
hsa-mir-626 AGGCCAGGAGTTCA DR2 
hsa-mir-645 TGAACCCTATTGTGAACT DR6 
hsa-mir-801 AGGTCACAAGGTCA DR2 
hsa-mir-9-2 TGAACCTTATGAACT DR3 
hsa-mir-92b TGAACCCCTGACCT DR2 
hsa-mir-9-3 AGGCCAGCCACGGTTCA DR5 
MicroRNA namePredicted siteSite type
hsa-let-7a-2 TGGCCTTCTTGAACT DR3 
hsa-let-7a-3 TGGCCTGAGCTGACCG DR4 
hsa-let-7c TGAACTATTGTTGAACG DR5 
hsa-let-7d TAACCTGTTAAATTAGGTCA ER8 
hsa-mir-100 AGGTCAGGAGTTCA DR2 
hsa-mir-10b TGTTCAGACAGGTCA DR3 
hsa-mir-130a TGACCCAGTGAACT DR2 
hsa-mir-133b AGGCCAAGAAGTTCA DR3 
hsa-mir-135a-1 AGTTCATGACCT IR0 
hsa-mir-146a AGGTCAGGAGTTCA DR2 
hsa-mir-154 TGACCTCAGAATCATGGCCT DR8 
hsa-mir-183 mir-96 TGACCTTCTGGCCT DR2 
hsa-mir-194-2 mir-192 TAACCTCTCTGAACC DR3 
hsa-mir-196a-1 TGAACTCCTGACCT DR2 
hsa-mir-200c AGGTCAGCGAGGGGTCA DR5 
hsa-mir-205 TGACCTGCTCTGGACT DR4 
hsa-mir-210 TGACCCCTTGACCC DR2 
hsa-mir-217 TGAACTCCTGACCT DR2 
hsa-mir-22 TGAACTGGCCCTGACCC DR5 
hsa-mir-23a mir-27a mir-24-2 AGGCCAGGAGTTCA DR2 
hsa-mir-29b-2 TGACCCCATGAACC DR2 
hsa-mir-323 mir-758 TGACCTGCACTGCACC DR4 
hsa-mir-331 TGAACTCCTGGCCT DR2 
hsa-mir-345 TACCCTGGTGACCC DR2 
hsa-mir-34a AGGCCAGGAGTTCA DR2 
hsa-mir-365-2 AGGGCAGTAGAGGGTCA DR5 
hsa-mir-377 TGAACCATGTGACCG DR3 
hsa-mir-379 GGGGCATGAACT IR0 
hsa-mir-380 AGGTCAGTGAAGAGGCCA DR6 
hsa-mir-383 TGAACTCCTGACCT DR2 
hsa-mir-422a TGGCCTTGTTGACCT DR3 
hsa-mir-455 GGGTCACCCAGGGCCA DR4 
hsa-mir-497 mir-195 GGGCCAGGAGGTCA DR2 
hsa-mir-500 AGGTCAACAAAGTTCA DR4 
hsa-mir-507 mir-506 TGAACTCCTGGCCT DR2 
hsa-mir-513-2 AGGCCAGGTGCAGTGGGTCA DR8 
hsa-mir-516-1 AGGTCAGGAGTTCA DR2 
hsa-mir-516-3 TGAACTCCTGACCT DR2 
hsa-mir-517a TGACCTGGTCATGCACC DR5 
hsa-mir-518a-2 GGGTCACCTGAGGTCA DR4 
hsa-mir-518d TGAACTCCTGACCT DR2 
hsa-mir-519e AGGTCAGGAGTTCA DR2 
hsa-mir-520b AGTTCAGGAGTTCA DR2 
hsa-mir-520d TGGACTCCTGACCT DR2 
hsa-mir-520e AGGTCAGGAGTTCA DR2 
hsa-mir-520f AGGTCAGGAGTTCA DR2 
hsa-mir-521-2 TGAACTCCTGACCT DR2 
hsa-mir-524 AGTTCAGGAGTTCA DR2 
hsa-mir-527 TGCCCTCCAGCCTGGGTCA ER7 
hsa-mir-539 TGCACCAAGTTTGACCT DR5 
hsa-mir-548a-2 TGACCTCCTGGCCT DR2 
hsa-mir-551b TGACCTTCATTTTAACCT DR6 
hsa-mir-563 TGACCTTTCCCTGCACT DR5 
hsa-mir-573 AGGTTAGGAGTTCA DR2 
hsa-mir-583 TGGCCCCATGACCT DR2 
hsa-mir-607 TGAACTCCTGACCT DR2 
hsa-mir-612 TGAACTCCTGACCT DR2 
hsa-mir-613 AGGCCAGGAGTTCA DR2 
hsa-mir-622 AGGCCAGGCGGTCA DR2 
hsa-mir-626 AGGCCAGGAGTTCA DR2 
hsa-mir-645 TGAACCCTATTGTGAACT DR6 
hsa-mir-801 AGGTCACAAGGTCA DR2 
hsa-mir-9-2 TGAACCTTATGAACT DR3 
hsa-mir-92b TGAACCCCTGACCT DR2 
hsa-mir-9-3 AGGCCAGCCACGGTTCA DR5 

The site type describes the half-site combination (IR indicates inverted repeat; DR, direct repeat; ER, everted repeat) followed by the spacer size (eg, DR2 refers to a direct repeat with 2 bp between the half-sites).

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