Binding Interactions in the Core of HS3
HS3 DNase I Footprint22 23 . | Factors Bound18 23 . | Corresponding Phylogenetic . | Factors Bound to Phylogenetic . |
---|---|---|---|
. | . | Footprint . | Footprint Probes . |
Footprint 1 | GATA-1 | FP6 | GATA-1 |
Factor X | CSBP-2 | ||
Footprint 2 | Sp1 | Not conserved | ND |
TEF-2 | |||
4 unidentified proteins | |||
Footprint 3 | GATA-1 | FP7 | GATA-1 |
Footprint 4 | Sp1 | FP8, FP9, FP10, FP11 (partial) | Sp1 |
CACCC binding protein | SSP | ||
7 unidentified proteins | G1/G2 | ||
CSBP-2 | |||
YY1 (two sites) | |||
Footprint 5 | GATA-1 | FP9 (partial) | GATA-1 |
FP10 (partial), FP11 | YY1 | ||
CSBP-2 | |||
Footprint 6 | Sp1 | Not conserved | ND |
4 unidentified proteins |
HS3 DNase I Footprint22 23 . | Factors Bound18 23 . | Corresponding Phylogenetic . | Factors Bound to Phylogenetic . |
---|---|---|---|
. | . | Footprint . | Footprint Probes . |
Footprint 1 | GATA-1 | FP6 | GATA-1 |
Factor X | CSBP-2 | ||
Footprint 2 | Sp1 | Not conserved | ND |
TEF-2 | |||
4 unidentified proteins | |||
Footprint 3 | GATA-1 | FP7 | GATA-1 |
Footprint 4 | Sp1 | FP8, FP9, FP10, FP11 (partial) | Sp1 |
CACCC binding protein | SSP | ||
7 unidentified proteins | G1/G2 | ||
CSBP-2 | |||
YY1 (two sites) | |||
Footprint 5 | GATA-1 | FP9 (partial) | GATA-1 |
FP10 (partial), FP11 | YY1 | ||
CSBP-2 | |||
Footprint 6 | Sp1 | Not conserved | ND |
4 unidentified proteins |
Abbreviation: ND, not determined.